 |
Job Description | P77746 | Confidence | 95.77% | Date | Thu Jan 5 12:32:26 GMT 2012 |
Rank | 112 | Aligned Residues | 59 |
% Identity | 22% | Template | d1biaa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Biotin repressor-like
|
Resolution | 2.30 |
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | F | D | L | N | L | L | V | I | F | E | C | I | Y | Q | H | L | . |
. |
S | I | S | K | A | A | E | S | L | Y | I | T | P | S | A | V | S | Q | S | L | Q | R | L | R | A | Q | F | N | D | P | L | F | I | R | S | G | K | G | I | A | P | T | T |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |
|   |   |
|
|   |   |
| . | . |
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |
|   |
|   |   |
|   |   | . |   |
|   |   |
|   |
|   |   |
|   |
|
|
|
|   |   |
Template Sequence |   |
K | D | N | T | V | P | L | K | L | I | A | L | L | A | N | G | E | F | H | S | G | E | Q | L | G | E | T | L | G | M | S | R | A | A | I | N | K | H | I | Q | T | L | R | D | . |
W | G | V | D | V | F | T | V | P | G | K | G | Y | S | L | P | E |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  | T | T | S | S |
| B |
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T |
|
|
|  |  |  | T | T | T |  |  |  |
| S |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|