Job Description P77746 Confidence 99.72% Date Thu Jan 5 12:32:26 GMT 2012 Rank 27 Aligned Residues 199 % Identity 11% Template c3hhfB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis. Resolution 2.30 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	K	N	F	I	I	Y	G	P	Q	L	I	S	C	S	N	N	S	M	L	I	R	C	L	R	Q	D	S	S	V	E	I	E	C	H	D	I	L	M	S	A	E	N	A	E	E	L	L	V	H	R	K	A	D	L	V	I	T	Q	M	P	V	I	S	R	S	V	I	C	M	P	L	H	T	I	R	N	T	L
Query Conservation
Alig confidence																																																	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		P	Q	G	V	L	S	V	D	S	A	X	P	X	V	L	H	L	L	A	P	L	A	A	K	F	N	E	R	Y	P	H	I	R	L	S	L	V	S	S	E	G	Y	I	N	L	I	E	.	.	.	.	.	.	R	K	V	D	I	A	L	R	A	G	D	D	S	G	L	R	A	R	H	L	F	D	S	R	F	R	V
Template Known Secondary structure																		T													T	T									S	T	T					T	.	.	.	.	.	.	T	S	S	S									S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		176	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		I	C	S	N	R	H	P	.	R	I	T	D	N	S	T	Y	E	Q	I	M	A	E	E	F	T	Q	L	I	S	K	S	A	G	V	D	D	I	Q	M	E	I	D	E	R	F	M	N	R	K	I	S	F	R	G	S	S	L	L	T	I	I	N	S	I	A	V	T	D	L	L	G	I	V	P	Y	E	L	Y	N	S
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		I	A	S	P	E	Y	L	A	K	H	G	T	P	Q	S	T	E	E	L	A	G	H	Q	C	L	G	F	T	E	P	G	S	L	N	T	W	A	V	L	D	A	Q	G	N	P	Y	K	I	S	P	H	F	T	A	S	S	G	E	I	L	R	S	L	C	L	S	G	C	G	I	V	C	L	S	D	F	L	V	D	N
Template Known Secondary structure															S	S	G	G	G	G	G	G	S		B				S	S		G	G	G	G							T	T	S								S	S			S	S										T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		Y	R	D	F	L	N	L	K	E	I	.	K	L	E	H	P	L	P	S	I	K	L	Y	I	S	Y	N	K	S	S	L	N	N	L	V	F	S	R	F	I	D	R	L	N	E	S	F
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		D	I	A	E	G	K	L	I	P	L	L	A	E	Q	T	S	D	K	T	H	P	F	N	A	V	Y	Y	S	D	K	A	V	N	L	R	L	R	V	F	L	D	F	L	V	E	E	L
Template Known Secondary structure						T	S	S					T	T	T	B													G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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