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Job DescriptionP77746
Confidence72.79%DateThu Jan 5 12:32:26 GMT 2012
Rank247Aligned Residues201
% Identity11%Templatec3e4rA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:nitrate transport protein; PDBTitle: crystal structure of the alkanesulfonate binding protein2 (ssua) from the phytopathogenic bacteria xanthomonas3 axonopodis pv. citri bound to hepes
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120.........130.........140.........150....... ..160....
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Query Sequence  SELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMP. . . . . . . . . VISRSVI
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Template Sequence  AAEPAQLRIGYQKAVSSLVLAKQHRLLEQRFPRTKITWVEFPAGPQLLEALNVGSIDLGGAGDIPPLFAQAAGADLLYVG
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   25....30.........40.........50.........60.........70.........80.........90.........100....
 
   165....170.........180.........190.........200.........210.........220.... .....230.........240..
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Query Sequence  CMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKI. . SFRGSSLLTIINSIAVTD
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Template Sequence  WVPPTPKAETILVPSK. . . . . SALRTVADLKGKRIAFQKGSSAHNLLLRVLAKSGLSMRDITPLYLSPANARAAFAAGQV
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GGGTT.....



SGGGGTT

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GGGS

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   105....110.........120 .........130.........140.........150.........160.........170.........
 
   243......250.........260.........270.........280...... ...290.........
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Query Sequence  LLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNN. . LVFSRFIDRLNES
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Template Sequence  DAWAIWDPWYSALTLDGSARLLANGEGLGLTGGFFLSSRRYATAWGPFVQQVMGTLNQA
Template Known Secondary structure  STTTTSSTTS



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   180.........190.........200.........210.........220.........230........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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