Return to main results Retrieve Phyre Job Id

Job DescriptionP77746
Confidence20.13%DateThu Jan 5 12:32:26 GMT 2012
Rank435Aligned Residues97
% Identity4%Templatec2qpqC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:protein bug27; PDBTitle: structure of bug27 from bordetella pertussis
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   168.170.........180.........190....... ..200.........210.........220.........230.........240...
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Query Sequence  LHTIRNTLICSNRHPRITDNSTYEQIMAEE. . . . FTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDL
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Template Sequence  VAYVPSVFVVPAGSKYKTLGELMAAAKQTNTQVTYGSCGNGTPQHLAGELLNVSAKTHMVHVPYKGCGPALNDVLGSQIG
Template Known Secondary structure  TT
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   244.....250.........260....
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Query Sequence  LGIVPYELYNSYRDFLNLKEI
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Template Sequence  LAVVTASSAIPFIKAGKLQAL
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   179180.........190.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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