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Job Description | P77746 | Confidence | 20.13% | Date | Thu Jan 5 12:32:26 GMT 2012 |
Rank | 435 | Aligned Residues | 97 |
% Identity | 4% | Template | c2qpqC_ |
PDB info |
PDB header:transport protein | Chain: C: PDB Molecule:protein bug27; |
PDBTitle: structure of bug27 from bordetella pertussis
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Resolution | 1.92 Å |
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168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | H | T | I | R | N | T | L | I | C | S | N | R | H | P | R | I | T | D | N | S | T | Y | E | Q | I | M | A | E | E | . |
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F | T | Q | L | I | S | K | S | A | G | V | D | D | I | Q | M | E | I | D | E | R | F | M | N | R | K | I | S | F | R | G | S | S | L | L | T | I | I | N | S | I | A | V | T | D | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | A | Y | V | P | S | V | F | V | V | P | A | G | S | K | Y | K | T | L | G | E | L | M | A | A | A | K | Q | T | N | T | Q | V | T | Y | G | S | C | G | N | G | T | P | Q | H | L | A | G | E | L | L | N | V | S | A | K | T | H | M | V | H | V | P | Y | K | G | C | G | P | A | L | N | D | V | L | G | S | Q | I | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
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244 | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | G | I | V | P | Y | E | L | Y | N | S | Y | R | D | F | L | N | L | K | E | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | A | V | V | T | A | S | S | A | I | P | F | I | K | A | G | K | L | Q | A | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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