Job Description P77746 Confidence 99.81% Date Thu Jan 5 12:32:26 GMT 2012 Rank 17 Aligned Residues 197 % Identity 18% Template c2hxrA_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional regulator cynr; PDBTitle: structure of the ligand binding domain of e. coli cynr, a2 transcriptional regulator controlling cyanate metabolism Resolution 2.05 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	I	I	Y	G	P	Q	L	I	S	C	S	N	N	S	M	L	I	R	C	L	R	Q	D	S	S	V	E	I	E	C	H	D	I	L	M	S	A	E	N	A	E	E	L	L	V	H	R	K	A	D	L	V	I	T	Q	M	P	V	I	S	R	S	V	I	C	M	P	L	H	T	I	R	N	T	L	I	C	S
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		S	L	R	I	A	V	T	P	T	F	T	S	Y	F	I	G	P	L	X	A	D	F	Y	A	R	Y	P	S	I	T	L	.	Q	L	Q	E	X	S	Q	E	K	I	E	D	X	L	C	R	D	E	L	D	V	G	I	A	F	A	P	V	H	S	P	E	L	E	A	I	P	L	L	T	E	S	L	A	L	V	V	A
Template Known Secondary structure													T	T	T													T	T	S			.																T	T	S		S						S	S				T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		179	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		N	R	H	P	R	I	.	T	D	N	S	T	Y	E	Q	I	M	A	E	E	F	T	Q	L	I	S	K	S	A	G	V	D	D	I	Q	M	E	I	D	E	R	F	M	N	R	K	I	S	F	R	G	S	S	L	L	T	I	I	N	S	I	A	V	T	D	L	L	G	I	V	P	Y	E	L	Y	N	S	Y	R	D
Query Conservation								.
Alig confidence								.																																																																								.	.
Template Conservation																																																																																.	.
Template Sequence		Q	H	H	P	L	A	V	H	E	Q	V	A	L	S	R	L	H	D	E	K	L	V	L	L	S	A	E	F	A	T	R	E	Q	I	D	H	Y	C	E	K	A	G	L	H	P	Q	V	V	I	E	A	N	S	I	S	A	V	L	E	L	I	R	R	T	S	L	S	T	L	L	P	A	A	I	A	T	Q	H	.	.
Template Known Secondary structure		T	T	S	G	G	G	G		S				G	G	G	G	G	G								T	T	S													T	T										S												S	S		B					T							.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	N	L	K	E	I	K	L	E	H	P	L	P	S	I	K	L	Y	I	S	Y	N	K	S	S	L	N	N	L	V	F	S	R	F	I	D	R	L	N	E	S
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	D	G	L	K	A	I	S	L	A	P	P	L	L	E	R	T	A	V	L	L	R	R	K	N	S	W	Q	T	A	A	A	K	A	F	L	H	X	A	L	D	K
Template Known Secondary structure		.	T	T							S	S		S											T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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