Job Description P77746 Confidence 89.92% Date Thu Jan 5 12:32:26 GMT 2012 Rank 190 Aligned Residues 69 % Identity 6% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		K	K	F	D	L	N	L	L	V	I	F	E	C	I	Y	Q	H	L	.	S	I	S	K	A	A	E	S	L	Y	I	T	P	S	A	V	S	Q	S	L	Q	R	L	R	A	Q	F	N	D	P	L	F	I	R	S	G	K	G	I	A	P	T	T	T	G	L	N	L	H	H	H	L	E	K
Query Conservation																				.
Alig confidence																				.																															.	.	.
Template Conservation																																																			.	.	.
Template Sequence		S	A	L	S	D	T	E	R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	.	.	.	R	A	P	R	R	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S
Template Known Secondary structure																		T	T											T												S	G	G	G	T	T				.	.	.							S	S
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions