 |
Job Description | P0ACI3 | Confidence | 78.56% | Date | Thu Jan 5 11:18:15 GMT 2012 |
Rank | 357 | Aligned Residues | 47 |
% Identity | 9% | Template | d2croa_ |
SCOP info | lambda repressor-like DNA-binding domains
| lambda repressor-like DNA-binding domains
| Phage repressors
|
Resolution | 2.35 |
|
 |
  |   |
287 | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 330 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | Q | A | M | H | Y | I | R | N | H | A | C | K | G | I | K | V | D | Q | V | L | D | A | V | G | I | S | R | S | N | L | E | K | R | F | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | E | V | G | E | T | I | H | A | M | I | H |
Query Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |   |
|   |   |   |
| . | . |
|
|   |   |   |
|
|   |   |   |
|
|
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |   |
|
|   |
Template Sequence |   |
L | S | E | R | L | K | K | R | R | I | A | L | K | . |
. |
M | T | Q | T | E | L | A | T | K | A | G | V | K | Q | Q | S | I | Q | L | I | E | A | G | V | T | K | R | P | R | F | L | F | E | I | A | M | A | L | N | C | D | P | V | W | L | Q | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | . | . |
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  | T | T |
|
| S | S |
| T | T |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | |
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|