 |
Job Description | P0ACI3 | Confidence | 70.56% | Date | Thu Jan 5 11:18:15 GMT 2012 |
Rank | 416 | Aligned Residues | 76 |
% Identity | 8% | Template | d1yioa2 |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | 2.20 |
|
 |
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 70 | . | . | . | . | . | . | |
|
. | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
Query Sequence |   |
L | L | F | N | A | N | K | A | Y | D | R | Q | V | V | E | G | V | G | E | Y | L | Q | A | S | Q | S | E | W | D | I | F | I | E | E | D | F | R | A | R | I | D | K | I | K | D | W | L | G | D | G | V | I | A | D | F | D | D | K | . |
. |
. |
. |
. |
Q | I | E | Q | A | L | A | D | V | . |
. |
D | V | P | I | V | G |
Query Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |
|   |   |   | . | . |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   | . | . | . | . | . |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |
Template Sequence |   |
V | F | V | V | D | D | D | M | S | V | R | E | G | L | R | N | L | L | R | . |
. |
. |
. |
. |
S | A | G | F | E | V | E | T | F | D | C | A | S | T | F | L | E | H | R | R | P | E | Q | H | G | C | L | V | L | D | M | R | M | P | G | M | S | G | I | E | L | Q | E | Q | L | T | A | I | S | D | G | I | P | I | V | F |
Template Known Secondary structure |   |
 |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | T | T | T |
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  | S |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
83 | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | G | S | Y | H | L | A |
Query Conservation |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
Template Sequence |   |
I | T | A | H | G | D | I | P |
Template Known Secondary structure |   |
 |  | S |
| T | T | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|