Job Description P0ACI3 Confidence 94.56% Date Thu Jan 5 11:18:15 GMT 2012 Rank 123 Aligned Residues 197 % Identity 12% Template c3sm9A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:metabotropic glutamate receptor 3; PDBTitle: crystal structure of metabotropic glutamate receptor 3 precursor in2 presence of ly341495 antagonist Resolution 2.26 Å

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		7	.	.	10	.	.	.	.													.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.									.	.	.	.	.	.	.	40	.	.	.	.	.								.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.														.	.	.	.	.	.	.														.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.														.	.	.	.	.	.	.														.
Query Sequence		R	I	T	L	L	F	N	A	.	.	.	.	.	.	.	.	.	.	.	.	N	K	A	Y	D	R	Q	V	V	E	G	V	G	E	Y	L	Q	A	.	.	.	.	.	.	.	.	S	Q	S	E	W	D	I	F	I	E	E	D	F	.	.	.	.	.	.	.	R	A	R	I	D	K	I	K	D	W	L	G	D	.
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.														.	.	.	.	.	.	.														.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.														.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		V	L	G	G	L	F	P	I	N	E	K	G	T	T	E	E	C	G	R	I	N	E	D	R	G	I	Q	R	L	E	A	M	L	F	A	I	D	E	I	N	K	D	D	Y	L	L	P	G	V	K	L	G	V	H	I	L	D	T	C	S	R	D	T	Y	A	L	E	Q	S	L	E	F	V	R	A	S	L	L	I	A
Template Known Secondary structure																	S						T	T	T	T																		S	S	S	S	T	T											T	T															T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		59	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure											.	.	.																																		.	.	.
Query SS confidence											.	.	.																																		.	.	.
Query Sequence		G	V	I	A	D	F	D	D	K	.	.	.	Q	I	E	Q	A	L	A	D	V	D	V	P	I	V	G	V	G	G	S	Y	H	L	A	E	S	Y	P	P	V	H	Y	I	A	.	.	.	T	D	N	Y	A	L	V	E	S	A	F	L	H	L	K	E	K	G	V	N	R	F	A	F	Y	G	L	P	E	S	S	G
Query Conservation											.	.	.																																		.	.	.
Alig confidence											.	.	.																																		.	.	.																										.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		G	V	I	G	G	S	Y	S	S	V	S	I	Q	V	A	N	L	L	R	L	F	Q	I	P	Q	I	S	Y	A	S	T	S	A	K	L	S	D	K	S	R	Y	D	Y	F	A	R	T	V	P	P	D	F	Y	Q	A	K	A	M	A	E	I	L	R	F	F	N	W	T	Y	V	S	T	V	.	.	.	.	A	S	E
Template Known Secondary structure							S	S												G	G	G	T						S	S				G	G	G	G		T	T	T	T	T	T				S	S			T														T	T								.	.	.	.			S
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	W	A	T	E	R	E	Y	A	F	R	Q	L	V	A	E	E	K	Y	R	G	V	V	Y	Q	G	L	E	T	A	P	E	N	W	Q	H	A	Q	N	R	L	A	D	W	L	Q	T	L	P	P	Q	T	G	I	I	A	V	T	D	A	R	A	R	H	I	L	Q	V	C	E	H	L	H	I	P	V	P
Query Conservation
Alig confidence																															.	.	.
Template Conservation																															.	.	.
Template Sequence		G	D	Y	G	E	T	G	I	E	A	F	E	Q	E	A	R	L	R	N	I	S	I	A	T	A	E	K	V	G	.	.	.	R	I	R	K	S	Y	D	S	V	I	R	E	L	L	Q	K	P	N	A	R	V	V	V	L	F	M	R	S	D	D	S	R	E	L	I	A	A	A	S	R	A	N	A	S	F	T
Template Known Secondary structure		S																T	T	T											.	.	.															T		T	T																							T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions