Job Description P0ACI3 Confidence 98.58% Date Thu Jan 5 11:18:15 GMT 2012 Rank 88 Aligned Residues 195 % Identity 8% Template c3sg0A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: the crystal structure of an extracellular ligand-binding receptor from2 rhodopseudomonas palustris haa2 Resolution 1.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.
Predicted Secondary structure																.	.	.															.	.	.												.	.	.	.	.																									.	.	.
Query SS confidence																.	.	.															.	.	.												.	.	.	.	.																									.	.	.
Query Sequence		R	I	T	L	L	F	N	A	N	K	A	Y	D	R	.	.	.	Q	V	V	E	G	V	G	E	Y	L	Q	A	S	Q	.	.	.	S	E	W	D	I	F	I	E	E	D	F	.	.	.	.	.	R	A	R	I	D	K	I	K	D	W	L	G	D	G	V	I	A	D	F	D	D	K	Q	I	.	.	.	E	Q	A
Query Conservation																.	.	.															.	.	.												.	.	.	.	.																									.	.	.
Alig confidence																.	.	.															.	.	.												.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		K	I	G	I	T	X	S	A	S	G	P	G	A	A	L	G	Q	P	Q	S	K	T	V	A	A	L	P	K	E	I	G	G	E	K	V	T	Y	F	A	L	D	D	E	S	D	P	T	K	A	A	Q	N	A	R	K	L	L	S	E	E	K	V	D	V	L	I	G	S	S	L	T	P	V	S	L	P	L	I	D	I
Template Known Secondary structure										S	S	T	T											G	G	G	S		S			T	T											T	T															T	S			S						S	S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		L	A	D	V	D	V	P	I	V	G	V	G	G	S	Y	H	L	.	.	.	.	A	E	S	Y	P	P	V	H	Y	I	A	T	D	N	Y	A	L	V	E	S	A	F	L	H	L	K	E	K	G	V	N	R	F	A	F	Y	G	L	P	E	S	S	G	K	R	W	A	T	E	R	E	Y	A	F	R	Q	L	V	A
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																																					.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		A	A	E	A	K	T	P	L	X	T	X	A	A	A	A	I	L	V	A	P	X	D	E	R	R	K	W	V	Y	K	V	V	P	N	D	D	I	X	A	E	A	I	G	K	Y	I	A	K	T	G	A	K	K	V	G	Y	I	.	.	.	.	G	F	S	D	A	Y	G	E	G	Y	Y	K	V	L	A	A	A	A	P
Template Known Secondary structure					T	T										G	G	G	T		S			T	T	G	G	G					S																	T	T								.	.	.	.			S	S
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		E	E	K	Y	R	G	V	V	Y	Q	G	L	E	T	A	P	E	N	W	Q	H	A	Q	N	R	L	A	D	W	L	Q	T	L	P	P	Q	T	G	I	I	.	A	V	T	D	A	R	A	R	H	I	L	Q	V	C	E	H	L	H	I	P	V	P
Query Conservation																																										.
Alig confidence																														.	.	.	.	.								.
Template Conservation																														.	.	.	.	.
Template Sequence		K	L	G	F	E	L	T	T	H	E	V	Y	A	R	S	D	A	S	V	T	G	Q	V	L	K	I	I	A	.	.	.	.	.	T	K	P	D	A	V	F	I	A	S	A	G	T	P	A	V	L	P	Q	K	A	L	R	E	R	G	F	K	G	A
Template Known Secondary structure				T											T	T		S												.	.	.	.	.	T			S								S	G	G	G										T	T			S
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions