Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACI3
Confidence98.54%DateThu Jan 5 11:18:15 GMT 2012
Rank89Aligned Residues195
% Identity14%Templatec3lopA_
PDB info PDB header:substrate binding proteinChain: A: PDB Molecule:substrate binding periplasmic protein; PDBTitle: crystal structure of substrate-binding periplasmic protein2 (pbp) from ralstonia solanacearum
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10..... ....20.........30.. .......40.... .....50.........60.........
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Query Sequence  RITLLFNAN. . . KAYDRQVVEGVGEYLQA. . . . . . . SQSEWDIFIEED. . . . . . . FRARIDKIKDWLGDGVIADFDDKQI
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Template Sequence  SVIQSLPLSGSQAVTGRALNAGARLYFDWLNLNGGINGETIRLVARDDEQKIEQTVRNVRDXARVDNPVALLTVVGTANV
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SSSTTTTTBTTB

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   37..40.........50.........60.........70.........80.........90.........100.........110......
 
   70.........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  . . . . . EQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFR
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Template Sequence  EALXREGVLAEARLPLVGPATGASSXTTDPLVFPIKASYQQEIDKXITALVTIGVTRIGVL. . . . YQEDALGKEAITGVE
Template Known Secondary structure  TTT

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   117..120.........130.........140.........150.........160.........170....... ..180.........190..
 
   145....150.........160.........170.........180........ .190.........200.........210
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Query Sequence  QLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGII. AVTDARARHILQVCEHLHIPVP
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Template Sequence  RTLKAHALAITAXASYPRNTANVGPAVDKLLA. . . . . ADVQAIFLGATAEPAAQFVRQYRARGGEAQ
Template Known Secondary structure  TTT


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   193......200.........210.........220.... .....230.........240.........250....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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