Job Description P0ACI3 Confidence 100.00% Date Thu Jan 5 11:18:15 GMT 2012 Rank 9 Aligned Residues 264 % Identity 16% Template c3k9cA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, laci family protein; PDBTitle: crystal structure of laci transcriptional regulator from rhodococcus2 species. Resolution 2.14 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																							.	.	.																						.
Query SS confidence																																							.	.	.																						.
Query Sequence		H	R	I	T	L	L	F	N	A	N	K	A	Y	D	R	Q	V	V	E	G	V	G	E	Y	L	Q	A	S	Q	S	E	W	D	I	F	I	E	.	.	.	E	D	F	R	A	R	I	D	K	I	K	D	W	L	G	D	G	V	I	A	D	.	F	D	D	K	Q	I	E	Q	A	L	A	D	V	D	V	P	I	V
Query Conservation																																							.	.	.																						.
Alig confidence																																							.	.	.																						.
Template Conservation
Template Sequence		R	L	L	G	V	V	F	E	L	Q	Q	P	F	H	G	D	L	V	E	Q	I	Y	A	A	A	T	R	R	G	Y	D	V	X	L	S	A	V	A	P	S	R	A	E	K	V	A	V	Q	A	L	X	R	E	R	C	E	A	A	I	L	L	G	T	R	F	D	T	D	E	L	G	A	L	A	D	R	V	P	A	L
Template Known Secondary structure										T	T																		T	T									B	T	T	B										T	T	T	T								T													T	T	S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	G	S	Y	H	L	A	E	S	Y	P	P	V	H	Y	I	A	T	D	N	Y	A	L	V	E	S	A	F	L	H	L	K	E	K	G	V	N	R	F	A	F	Y	G	L	P	E	S	S	G	K	R	W	A	T	E	R	E	Y	A	F	R	Q	L	V	A	E	E	K	Y	R	G	V	V	Y	Q	G	L	E
Query Conservation
Alig confidence											.	.	.	.																																							.	.	.																								.	.
Template Conservation											.	.	.	.																																							.	.	.																								.	.
Template Sequence		V	V	A	R	A	S	G	L	P	.	.	.	.	G	V	G	A	V	R	G	D	D	V	A	G	I	T	L	A	V	D	H	L	T	E	L	G	H	R	N	I	A	H	I	D	G	A	D	A	P	G	.	.	.	G	A	D	R	R	A	G	F	L	A	A	X	D	R	H	G	L	S	A	S	A	T	V	.	.	V
Template Known Secondary structure				S	S			S	S	T	.	.	.	.	T	S																					T	T			S							T	T	S	T	T	.	.	.															T	T		G	G	G				.	.
Template Predicted Secondary structure											.	.	.	.																																							.	.	.																								.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	P	E	N	W	Q	H	A	Q	N	R	L	A	D	W	L	Q	T	L	P	P	Q	T	G	I	I	A	V	T	D	A	R	A	R	H	I	L	Q	V	C	E	H	L	H	I	P	V	P	E	K	L	C	V	I	G	I	D	N	E	E	L	T	R	Y	L	S	R	V	A	L	S	S	V	A	Q	G	A	R	Q
Query Conservation
Alig confidence																																																															.
Template Conservation																																																															.
Template Sequence		T	G	G	T	T	E	T	E	G	A	E	G	X	H	T	L	L	E	X	P	T	P	P	T	A	V	V	A	F	N	D	R	C	A	T	G	V	L	D	L	L	V	R	S	G	R	D	V	P	A	D	I	S	V	V	G	Y	D	D	S	R	.	L	A	R	I	P	H	V	Q	X	T	T	I	S	Q	D	A	T	H
Template Known Secondary structure					S	S													T	S	S	S			S					S	S														T	T			T	T	T	T										T	.	T	T	T		T	T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	Y	Q	A	A	K	L	L	H	R	L	L	D	K	E	E	M	P	L	Q	R	I	L	V	P	P	V	R	V	I	E	R	R	S	T	D	Y	R	S	L
Query Conservation
Alig confidence																					.	.							.
Template Conservation																					.	.							.
Template Sequence		X	A	E	A	A	V	D	G	A	L	A	Q	I	S	G	D	K	A	V	.	.	D	L	V	L	A	P	.	H	L	V	R	R	A	T	T	G	P	V	A	H
Template Known Secondary structure																T					.	.							.						S	S			S
Template Predicted Secondary structure																					.	.							.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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