Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACI3
Confidence100.00%DateThu Jan 5 11:18:15 GMT 2012
Rank1Aligned Residues263
% Identity21%Templatec3h5oB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator gntr; PDBTitle: the crystal structure of transcription regulator gntr from2 chromobacterium violaceum
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  HRITLLF. NANKAYDRQVVEGVGEYLQASQSEWDIFIEED. . . . FRARIDKIKDWLGDGVIAD. . FDDKQIEQALADVDV
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Template Sequence  RTVLVLIPSLANTVFLETLTGIETVLDAAGYQXLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAEPFERILSQHAL
Template Known Secondary structure 
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STT
TTTT

TT
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TTTT
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   71........80.........90.........100.........110.........120.........130.........140.........150
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  PIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQ
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Template Sequence  PVVYXXDLADDG. . . . . RCCVGFSQEDAGAAITRHLLSRGKRRIGFLG. . . AQLDERVXKRLDGYRAALDAADCRDAGLE
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TT

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   151........160.. .......170.........180.........190... ......200.........210.........220..
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  GLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQG
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Template Sequence  WLDPQPSSXQXGADXLDRALAERPDCDALFCCNDDLAIGALARSQQLGIAVPERLAIAGFNDLQPA. AWCTPPLTTVATP
Template Known Secondary structure 
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TT

SSTT

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SB

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   223......230.........240.........250.........260.........270.........280........ .290.........300.
 
   239240.........250.........260.........270........
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Query Sequence  ARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTD
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Template Sequence  RRDIGVHAAKALLQLIDGEEPASRRADLGF. RLXLRRSSE
Template Known Secondary structure  TT


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   302.......310.........320.........330. ........340
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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