Job Description P0ACI3 Confidence 91.89% Date Thu Jan 5 11:18:15 GMT 2012 Rank 141 Aligned Residues 93 % Identity 8% Template c3gziA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a transcriptional regulator of the tetr family2 (shew_3567) from shewanella loihica pv-4 at 2.05 a resolution Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	P	A	V	I	Q	A	M	H	Y	I	R	N	H	A	C	K	G	I	K	V	D	Q	V	L	D	A	V	G	I	S	R	S	N	L	E	K	R	F	K	E	E	V	G	E	T	I	H	A	M	I	H	A	E	K	L	E	K	A	R	S	L	L	I	S	T	T	L	S	I	N	E	I	S	Q	M	C	G	Y
Query Conservation
Alig confidence																																												.	.	.	.	.	.																				.	.	.
Template Conservation																																												.	.	.	.	.	.																				.	.	.
Template Sequence		R	D	K	L	I	L	A	A	R	N	L	F	I	E	R	P	Y	A	Q	V	S	I	R	E	I	A	S	L	A	G	T	D	P	G	L	I	R	Y	Y	F	G	S	.	.	.	.	.	.	K	E	K	L	F	S	T	X	I	H	E	T	A	X	P	V	L	A	Q	.	.	.	L	H	K	A	R	R	E	T	R	Q
Template Known Secondary structure															T	S			S												T	S		T								S	S	.	.	.	.	.	.																				.	.	.							T	S		T
Template Predicted Secondary structure																																												.	.	.	.	.	.																				.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	L	Q	Y	F	Y	S	V	F	K	K	A	Y	D	T	T	P	K	E	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	P	A	A	L	L	Q	T	Y	Y	S	V	X	S	K	H	P	H	F	P	R
Template Known Secondary structure		T																S	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions