Job Description P0ACI3 Confidence 100.00% Date Thu Jan 5 11:18:15 GMT 2012 Rank 40 Aligned Residues 248 % Identity 15% Template c3bilA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable laci-family transcriptional regulator; PDBTitle: crystal structure of a probable laci family transcriptional2 regulator from corynebacterium glutamicum Resolution 2.50 Å

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		7	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure								.																																	.	.	.	.																				.
Query SS confidence								.																																	.	.	.	.																				.
Query Sequence		R	I	T	L	L	F	.	N	A	N	K	A	Y	D	R	Q	V	V	E	G	V	G	E	Y	L	Q	A	S	Q	S	E	W	D	I	F	I	E	E	D	.	.	.	.	F	R	A	R	I	D	K	I	K	D	W	L	G	D	G	V	I	A	D	.	F	D	D	K	Q	I	E	Q	A	L	A	D	V	D	V	P	I
Query Conservation								.																																	.	.	.	.																				.
Alig confidence								.																																	.	.	.	.																				.
Template Conservation
Template Sequence		T	I	G	V	I	V	P	S	L	I	N	H	Y	F	A	A	M	V	T	E	I	Q	S	T	A	S	K	A	G	L	A	T	I	I	T	N	S	N	E	D	A	T	T	M	S	G	S	L	E	F	L	T	S	H	G	V	D	G	I	I	C	V	P	N	E	E	C	A	N	Q	L	E	D	L	Q	K	Q	M	P	V
Template Known Secondary structure								S		S	S	S																	T	T									T	T															T	T		S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	V	G	G	S	Y	H	L	A	E	S	Y	P	P	V	H	Y	I	A	T	D	N	Y	A	L	V	E	S	A	F	L	H	L	K	E	K	G	V	N	R	F	A	F	Y	G	L	P	E	S	S	G	K	R	W	A	T	E	R	E	Y	A	F	R	Q	L	V	A	E	E	K	Y	R	G	V	V	Y	Q	G	L
Query Conservation
Alig confidence												.	.	.	.																																		.	.
Template Conservation												.	.	.	.																																		.	.
Template Sequence		V	L	V	D	R	E	L	P	G	D	.	.	.	.	T	I	P	T	A	T	S	N	P	Q	P	G	I	A	A	A	V	E	L	L	A	H	N	N	A	L	P	I	G	Y	L	S	G	.	.	P	M	D	T	S	T	G	R	E	R	L	E	D	F	K	A	A	C	A	N	S	K	I	G	E	Q	L	V	F	L	G
Template Known Secondary structure					S	S			S			.	.	.	.																							T	T			S							.	.		T	T	S																	T	T
Template Predicted Secondary structure												.	.	.	.																																		.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	A	P	E	N	W	Q	H	A	Q	N	R	L	A	D	W	L	Q	T	L	P	P	Q	T	G	I	I	A	V	T	D	A	R	A	R	H	I	L	Q	V	C	E	H	L	H	I	P	V	P	E	K	L	C	V	I	G	I	D	N	E	E	L	T	R	Y	L	S	R	V	A	L	S	S	V	A	Q	G	A	R
Query Conservation
Alig confidence																		.	.	.	.	.																																										.
Template Conservation																		.	.	.	.	.																																										.
Template Sequence		G	Y	E	Q	S	V	G	F	E	G	A	T	K	L	L	D	.	.	.	.	.	Q	G	A	K	T	L	F	A	G	D	S	M	M	T	I	G	V	I	E	A	C	H	K	A	G	L	V	I	G	K	D	V	S	V	I	G	F	D	T	H	P	.	L	F	A	L	Q	P	H	P	L	T	V	I	D	Q	N	V	E
Template Known Secondary structure			S	S														.	.	.	.	.	T	T		S					S	S														T	T			B	T	T	T	B						S			G	.	G	G	G	G	S	S	S
Template Predicted Secondary structure																		.	.	.	.	.																																										.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.						.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	G	Y	Q	A	A	K	L	L	H	R	L	L	D	K	E	E	M	P	L	Q	R	I	L	V	P	P	V	R	V	I	E	R	R	S	T
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	A	Q	R	A	V	S	I	L	T	E	L	T	T	.	.	.	.	.	.	.	.	.	.	.	I	P	T	A	L	I	H	R	E	S	I
Template Known Secondary structure																	.	.	.	.	.	.	.	.	.	.	.									S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.												.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions