Job Description P0ACI3 Confidence 72.84% Date Thu Jan 5 11:18:15 GMT 2012 Rank 403 Aligned Residues 74 % Identity 12% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

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Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.								.
Query SS confidence																																																												.	.	.	.	.								.
Query Sequence		L	L	F	N	A	N	K	A	Y	D	R	Q	V	V	E	G	V	G	E	Y	L	Q	A	S	Q	S	E	W	D	I	F	I	E	E	D	F	R	A	R	I	D	K	I	K	D	W	L	G	D	G	V	I	A	D	F	D	D	K	.	.	.	.	.	Q	I	E	Q	A	L	A	.	D	V	D	V	P	I	V	G	V
Query Conservation																																																												.	.	.	.	.								.
Alig confidence														.	.	.												.	.																															.	.	.	.	.								.
Template Conservation														.	.	.												.	.
Template Sequence		I	L	V	V	D	D	E	K	P	I	A	D	.	.	.	I	L	E	F	N	L	R	K	E	G	Y	.	.	E	V	H	C	A	H	D	G	N	E	A	V	E	M	V	E	E	L	Q	P	D	L	I	L	L	D	I	M	L	P	N	K	D	G	V	E	V	C	R	E	V	R	K	K	Y	D	M	P	I	I	M	L
Template Known Secondary structure							S							.	.	.										T		.	.							S														S						T	T		S	S	S															S
Template Predicted Secondary structure														.	.	.												.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		84	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	S	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	K	D	S
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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