Job Description P0ACI3 Confidence 94.69% Date Thu Jan 5 11:18:15 GMT 2012 Rank 122 Aligned Residues 199 % Identity 13% Template c2zskA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:226aa long hypothetical aspartate racemase; PDBTitle: crystal structure of ph1733, an aspartate racemase2 homologue, from pyrococcus horikoshii ot3 Resolution 2.55 Å

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		6	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure													.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	R	I	T	L	L	F	N	A	N	K	.	.	.	.	A	Y	D	R	Q	V	V	E	G	V	G	E	Y	L	Q	A	S	Q	S	E	W	D	I	F	I	E	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	A	R	I	D	K	I	K	D	W	L	G	D	G	V	I	A	D	F
Query Conservation													.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	I	G	I	I	G	G	T	T	P	E	S	T	L	Y	Y	Y	K	K	Y	I	E	I	S	R	E	K	F	E	K	Y	F	Y	P	E	L	I	I	Y	S	I	N	F	K	E	F	F	Q	N	P	E	G	W	E	G	R	K	K	I	L	I	N	A	A	K	A	L	E	R	A	G	A	E	L	I	A	F	A	A
Template Known Secondary structure										S	S																			S	S	T	T												T					T		T	T																				T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		65	.	.	.	.		70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure							.						.
Query SS confidence							.						.
Query Sequence		D	D	K	Q	I	.	E	Q	A	L	A	.	D	V	D	V	P	I	V	G	V	G	G	S	Y	H	L	A	E	S	Y	P	P	V	H	Y	I	A	T	D	N	Y	A	L	V	E	S	A	F	L	H	L	K	E	K	G	V	N	R	F	A	F	Y	G	L	P	E	S	S	G	K	R	W	A	T	E	R	E	Y	A
Query Conservation							.						.
Alig confidence							.						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Sequence		N	T	P	H	L	V	F	D	D	V	Q	R	E	V	N	V	P	M	V	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	A	V	A	E	E	I	L	K	R	G	V	R	K	V	L	L	L	G	T	K	T	T	M	T	A	D	.	.	.	.	.	.	.	F
Template Known Secondary structure		S	G	G	G	G	G									S	S		B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T								S	S	T	T	T	T	S			.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																								.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130								.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	Q	L	V	A	E	E	K	Y	R	G	V	V	Y	Q	G	L	E	T	A	P	E	N	W	Q	H	A	Q	N	R	L	A	D	W	L	Q	T	L	P	P	Q	T	G	I	I	A	V	T	D	A	R	A	R	H	I	L	Q	V	C	E	H	L	H	I	P	V	P	E	K	L	C	V	I	G	I	D	N	E	E
Query Conservation
Alig confidence											.	.	.	.	.																															.	.	.	.	.																	.	.	.	.
Template Conservation											.	.	.	.	.																															.	.	.	.	.																	.	.	.	.
Template Sequence		Y	I	K	T	L	E	E	K	G	.	.	.	.	.	L	E	V	V	V	P	N	D	E	E	K	E	E	L	N	R	I	I	F	E	E	L	A	F	G	N	L	K	N	K	.	.	.	.	.	E	W	I	V	R	L	I	E	K	Y	R	E	S	E	G	I	.	.	.	.	E	G	V	I	L	G	C	T	E	L	P
Template Known Secondary structure								T	T	T	.	.	.	.	.																					T	G	G	G	T			T	T		.	.	.	.	.														S			.	.	.	.	S						S	S	S	G	G
Template Predicted Secondary structure											.	.	.	.	.																															.	.	.	.	.																	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	Y	L	S	R	V	A	L	S	S	V	A	Q	G	A	R	Q	M	G	Y	Q	A	A	K	L
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		L	A	I	K	Q	G	D	V	S	V	E	V	F	D	.	S	A	E	I	H	M	R	K	L	I	E	L
Template Known Secondary structure		G	T			G	G	G	S	S	S					.
Template Predicted Secondary structure																.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions