Job Description P0ACI3 Confidence 88.89% Date Thu Jan 5 11:18:15 GMT 2012 Rank 229 Aligned Residues 171 % Identity 15% Template c2xecD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative maleate isomerase; PDBTitle: nocardia farcinica maleate cis-trans isomerase bound to2 tris Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	H	R	I	T	L	L	F	N	A	N	K	A	Y	D	R	Q	V	V	E	G	V	G	E	Y	L	Q	A	S	Q	S	E	W	D	I	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	D	F	R	A	R	I	D	K	I	K	D	W	L	G	D	G	V	I	A	D	F	D	D	K	Q
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		I	R	R	I	G	L	V	V	P	S	S	N	V	T	V	E	T	E	M	P	A	L	L	S	.	.	R	H	P	G	A	E	F	S	F	H	S	T	R	M	R	M	H	T	V	S	P	E	G	L	A	A	M	N	A	Q	R	E	R	C	V	L	E	I	A	D	A	A	P	E	V	I	L	Y	A	C	L	V	A	V
Template Known Secondary structure											T	T													T	.	.	T		S	S													S	B		S									T	T										T	T			S							S
Template Predicted Secondary structure																										.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		69											70	.	.	.	.	.							.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Query Sequence		I	.	.	.	.	.	.	.	.	.	.	E	Q	A	L	A	D	.	.	.	.	.	.	V	D	V	P	I	V	G	V	G	G	S	Y	H	L	A	E	S	Y	P	P	V	H	Y	I	A	T	D	N	Y	A	L	V	E	S	A	F	L	H	L	K	E	K	G	V	N	R	F	A	F	Y	G	L	P	E	S	S	G
Query Conservation			.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Sequence		M	V	G	G	P	G	E	H	H	R	V	E	S	A	V	A	E	Q	L	A	T	G	G	S	Q	A	L	V	R	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	L	V	E	G	L	R	A	L	D	A	Q	R	V	A	L	V	T	P	.	.	.	.	.
Template Known Secondary structure			T	T		T	T																T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T		S								.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																								.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.		.
Predicted Secondary structure																																	.	.	.	.	.	.																										.	.															.
Query SS confidence																																	.	.	.	.	.	.																										.	.															.
Query Sequence		K	R	W	A	T	E	R	E	Y	A	F	R	Q	L	V	A	E	E	K	Y	R	G	V	V	Y	Q	G	L	E	T	A	.	.	.	.	.	.	P	E	N	W	Q	H	A	Q	N	R	L	A	D	W	L	Q	T	L	P	P	Q	T	G	I	I	.	.	A	V	T	D	A	R	A	R	H	I	L	Q	V	C	.	E
Query Conservation																																	.	.	.	.	.	.																										.	.															.
Alig confidence		.	.																														.	.	.	.	.	.															.	.										.	.															.
Template Conservation		.	.																																																		.	.
Template Sequence		.	.	Y	M	R	P	L	A	E	K	V	V	A	Y	L	E	A	E	G	F	T	I	S	D	W	R	A	L	E	V	A	D	N	T	E	V	G	C	I	P	G	E	Q	V	M	A	A	A	R	S	L	.	.	D	L	S	E	V	D	A	L	V	I	S	C	C	V	Q	M	P	S	L	P	L	V	E	T	A	E	R
Template Known Secondary structure		.	.	S															T	T													B						T													S	.	.			T	T		S						S		S	S	S			G	G	G
Template Predicted Secondary structure		.	.																																																		.	.
Template SS confidence
				133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		204	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	H	I	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	G	I	P	V
Template Known Secondary structure				T	S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions