Job Description P0ACI3 Confidence 78.40% Date Thu Jan 5 11:18:15 GMT 2012 Rank 359 Aligned Residues 238 % Identity 12% Template c2higA_ PDB info PDB header:transferase Chain: A: PDB Molecule:6-phospho-1-fructokinase; PDBTitle: crystal structure of phosphofructokinase apoenzyme from trypanosoma2 brucei. Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.
Predicted Secondary structure														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	R	H	R	I	T	L	L	F	N	A	.	N	K	A	Y	D	R	Q	V	V	E	G	V	G	E	Y	L	Q	A	S	Q	S	E	W	D	I	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	E	T	T	I	G	I	V	T	C	G	G	I	C	P	G	L	N	D	V	I	R	S	I	T	L	T	G	I	N	V	Y	N	V	K	R	V	I	G	F	R	F	G	Y	W	G	L	S	K	K	G	S	Q	T	A	I	E	L	H	R	G	R	V	T	N	I	H	H	Y	G	G	T	I	L	G	S	S	R	G
Template Known Secondary structure		G	G	G									S	S			T	T																			S						S	T	G	G	G	G	G	S					T	T										T	T	G	G	G	S	S	S		S	S					S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.							.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																														.	.							.	.	.	.	.	.
Query SS confidence																														.	.							.	.	.	.	.	.
Query Sequence		E	E	D	F	R	A	R	I	D	K	I	K	D	W	L	G	D	G	V	I	A	D	F	D	D	K	Q	I	.	.	E	Q	A	L	A	D	.	.	.	.	.	.	V	D	V	P	I	V	G	V	G	G	S	Y	H	L	A	E	S	Y	P	P	V	H	Y	I	A	T	D	N	Y	A	L	V	E	S	A	F	L	H
Query Conservation																														.	.							.	.	.	.	.	.
Alig confidence																														.	.							.	.	.	.	.	.
Template Conservation
Template Sequence		P	Q	D	P	K	E	M	V	D	T	L	E	R	L	G	V	N	I	L	F	T	V	G	G	D	G	T	Q	R	G	A	L	V	I	S	Q	E	A	K	R	R	G	V	D	I	S	V	F	G	V	P	K	T	I	D	N	D	L	S	F	S	H	R	T	F	G	F	Q	T	A	V	E	K	A	V	Q	A	I	R	A
Template Known Secondary structure																T		S																									T												T	T	S	S				S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		114	.			.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure				.	.					.
Query SS confidence				.	.					.
Query Sequence		L	K	.	.	E	K	G	V	.	N	R	F	A	F	Y	G	L	P	E	S	S	G	K	R	W	A	T	E	R	E	Y	A	F	R	Q	L	V	A	E	E	K	Y	R	G	V	V	Y	Q	G	L	E	T	A	P	E	N	W	Q	H	A	Q	N	R	L	A	D	W	L	Q	T	L	P	P	Q	T	G	I	I	A	V
Query Conservation				.	.					.
Alig confidence				.	.					.											.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	A	E	A	V	S	A	N	Y	G	V	G	V	V	K	L	M	G	.	.	.	.	.	.	.	.	.	R	D	S	G	F	I	A	A	Q	A	A	V	A	S	A	Q	A	N	I	C	L	V	P	E	N	P	I	S	E	Q	E	V	M	S	L	L	E	R	R	F	C	H	S	R	S	C	V	I	I	V	A	E
Template Known Secondary structure								T	S	T	T										.	.	.	.	.	.	.	.	.	S	S													T			S					T	T	S															T	T	S		S								T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.										.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
																								191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	A	R	A	R	H	I	L	Q	V	C	E	H	L	H	I	P	V	P	E	K	L	C	V	I	G	I	D	N	E	E	L	T	R	Y	L	S	R	V	A	L	S	S	V	A	Q	G	A	R	Q	M	G	Y	Q	A	A	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.										.					.
Template Conservation																																											.										.					.
Template Sequence		G	F	G	Q	D	W	G	R	G	G	Y	D	A	S	G	N	K	K	L	I	D	I	G	V	I	L	T	E	K	V	K	A	F	L	K	A	N	K	S	R	Y	.	P	D	S	T	V	K	Y	I	D	.	P	S	Y	M	.	I	R	A	C	P	P	S	A	N	D	A	L	F	C	A	T	L	A	T	L	A	V	H
Template Known Secondary structure		T	T	T	G	G	G					B		T	T	S		B																			T	T	T	T	T	S	.	S	S								.					.			S	S
Template Predicted Secondary structure																																											.										.					.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.		.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		249	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	M	A
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions