Job Description P0ACI3 Confidence 88.55% Date Thu Jan 5 11:18:15 GMT 2012 Rank 235 Aligned Residues 77 % Identity 19% Template c1ys7B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulatory protein prra; PDBTitle: crystal structure of the response regulator protein prra comlexed with2 mg2+ Resolution 1.58 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.			.
Predicted Secondary structure																																																																	.	.	.	.	.										.	.
Query SS confidence																																																																	.	.	.	.	.										.	.
Query Sequence		R	H	R	I	T	L	L	F	N	A	N	K	A	Y	D	R	Q	V	V	E	G	V	G	E	Y	L	Q	A	S	Q	S	E	W	D	I	F	I	E	E	D	F	R	A	R	I	D	K	I	K	D	W	L	G	D	G	V	I	A	D	F	D	D	K	.	.	.	.	.	Q	I	E	Q	A	L	A	D	V	.	.	D
Query Conservation																																																																	.	.	.	.	.										.	.
Alig confidence						.									.	.	.	.																		.	.																												.	.	.	.	.										.	.
Template Conservation						.									.	.	.	.																		.	.
Template Sequence		S	P	R	V	.	L	V	V	D	D	D	S	D	.	.	.	.	V	L	A	S	L	E	R	G	L	R	L	S	G	F	E	V	A	.	.	T	A	V	D	G	A	E	A	L	R	S	A	T	E	N	R	P	D	A	I	V	L	D	I	N	M	P	V	L	D	G	V	S	V	V	T	A	L	R	A	M	D	N	D
Template Known Secondary structure						.					S				.	.	.	.												T	T					.	.			S	S											S			S						S	S		S	S	S												T	T
Template Predicted Secondary structure						.									.	.	.	.																		.	.
Template SS confidence
		7	.	.	10		.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	I	V	G	V	G	G	S	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	V	C	V	L	S	A	R	S	S
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions