 |
Job Description | P77172 | Confidence | 38.08% | Date | Thu Jan 5 12:25:57 GMT 2012 |
Rank | 361 | Aligned Residues | 114 |
% Identity | 11% | Template | d1id1a_ |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Potassium channel NAD-binding domain
|
Resolution | 2.40 |
|
 |
  |   |
590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | C | Q | A | R | F | P | V | E | V | S | Q | L | L | A | K | Y | Q | I | E | A | W | Q | L | I | F | E | V | T | E | S | N | A | L | T | N | V | K | Q | A | Q | I | T | L | Q | H | L | Q | E | L | G | C | Q | I | A | I | D | D | F | G | T | G | Y | A | S | Y | A | R | L | K | N | V | N | A | D | L | L | K | I | D |
Query Conservation |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
| . | . |   |
|
|   |   | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   | . | . | . | . |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   | . |
Template Sequence |   |
C | G | H | S | I | L | A | I | N | T | I | L | Q | L | N | Q | R | G | Q | N | V | . |
. |
T | V | I | S | N | . |
. |
. |
. |
. |
. |
. |
L | P | E | D | D | I | K | Q | L | E | Q | R | L | G | D | N | A | D | V | I | P | G | D | S | . |
. |
. |
. |
N | D | S | S | V | L | K | K | A | G | I | D | R | C | R | A | . |
Template Known Secondary structure |   |
 |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  | . | . |  |  |  |  |
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  | S |
| T | . | . | . | . | T | S |  |  |  |  |  |  |  | T | T | T | T |
| S |  | . |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . |  |  |  |  |  | . | . | . | . | . | . | . |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
. | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
  |
  |   |
670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | S | F | I | R | N | I | V | S | N | S | L | D | Y | Q | I | V | A | S | I | C | H | L | A | R | M | K | K | M | L | V | V | A | E | Y | V | E | N | E | E | I | R | E | A | V | L | S | L | G | I | D | Y | M |
Query Conservation |   |
  |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   | . | . |   |   |   |
|
|
|   | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|
Template Sequence |   |
. |
. |
I | L | A | L | S | D | N | D | A | D | N | A | F | V | V | L | S | A | K | D | M | S | S | . |
. |
D | V | K | T | V | L | A | . |
V | S | D | S | K | N | L | N | K | I | K | M | V | H | P | D | I | I |
Template Known Secondary structure |   |
. | . |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | . | . | S | S |
|  |  |  |  | . |
| S | S | G | G | G |  |  |  |  |  | T | T |
|
| S |  |  |
Template Predicted Secondary structure |   |
. | . |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
100 | . | . | . | . | . | . | |
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|