Return to main results Retrieve Phyre Job Id

Job DescriptionP77172
Confidence23.03%DateThu Jan 5 12:25:57 GMT 2012
Rank474Aligned Residues107
% Identity15%Templatec3n0rA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator; PDBTitle: structure of the phyr stress response regulator at 1.25 angstrom2 resolution
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   624.....630.........640.........650.........660.........670.........680.........690.........700...
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAE
Query Conservation              
   
  
 






 


  
  
  
 



 
 
            
  
   
      



Alig confidence 



















.










































.......








Template Conservation 
           
   
  
.   
     
           

 
   
    
         .......    


  
Template Sequence  DEPVIAADIEALVRELGHDV. TDIAATRGEALEAVTRRTPGLVLADIQLADGSSGIDAVKDILG. . . . . . . RXDVPVIFI
Template Known Secondary structure 
STT
.SS


SS

TTS

TTTTT.......TT

Template Predicted Secondary structure 






.















.......



Template SS confidence 















































































   148.150.........160....... ..170.........180.........190.........200.........210 .........
 
   704.....710.........720.........730.........740...
Predicted Secondary structure 















Query SS confidence 







































Query Sequence  YVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI
Query Conservation 



      
   
 
  


    
 
           
Alig confidence 
















.....

















Template Conservation 
                ..... 
 

     
   
   
Template Sequence  TAFPERLLTGERPEPTF. . . . . LITKPFQPETVKAAIGQA
Template Known Secondary structure  S
GGGG

SSS


SS.....SS

Template Predicted Secondary structure 







.....



Template SS confidence 







































   220.........230...... ...240.........250....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions