Job Description P77172 Confidence 99.92% Date Thu Jan 5 12:25:57 GMT 2012 Rank 16 Aligned Residues 153 % Identity 8% Template c3ignA_ PDB info PDB header:transferase Chain: A: PDB Molecule:diguanylate cyclase; PDBTitle: crystal structure of the ggdef domain from marinobacter2 aquaeolei diguanylate cyclase complexed with c-di-gmp -3 northeast structural genomics consortium target mqr89a Resolution 1.83 Å

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		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.									.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		R	L	A	Y	V	D	P	V	V	H	L	P	N	V	R	A	L	N	R	A	L	.	.	.	.	.	.	.	.	R	D	A	P	W	S	A	L	C	Y	L	R	I	P	G	M	E	M	L	V	K	N	Y	G	I	M	L	R	I	Q	Y	K	Q	K	L	S	H	W	L	S	P	L	L	E	P	G	E	D	V	Y	Q
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	S	X	T	D	R	L	T	G	L	L	N	R	G	T	W	E	N	L	V	D	A	E	Y	E	R	F	R	R	Y	G	Q	A	T	S	L	V	X	F	D	I	D	H	F	K	P	V	N	D	T	Y	G	H	L	A	G	D	E	V	I	R	H	T	A	D	V	T	R	N	N	I	R	Q	S	D	S	A	G	R
Template Known Secondary structure		T	T	S	S	B		T	T	T		S																																T	T																										T	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.				.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		L	S	G	N	D	L	A	L	R	L	N	T	E	S	H	Q	E	.	.	.	R	I	T	A	L	D	S	H	L	K	Q	F	R	F	F	W	D	G	M	P	M	Q	P	Q	I	G	V	S	Y	C	Y	V	R	S	P	V	N	H	I	Y	L	L	L	G	E	L	N	T	V	A	E	L	S	I	V	T	N	A	P	E
Query Conservation																			.	.	.
Alig confidence																			.	.	.
Template Conservation
Template Sequence		Y	G	G	E	E	F	G	I	I	L	P	E	T	D	A	E	S	A	R	V	I	C	E	R	I	R	E	A	I	E	K	S	T	V	S	T	S	A	G	D	I	Q	Y	T	V	S	X	G	I	A	Q	L	T	E	T	P	E	N	Y	X	Q	W	X	Q	K	A	D	E	A	L	Y	K	A	K	E	S	G	R	N	K
Template Known Secondary structure			S	S	S								T																			T						S	S																S			S	S																		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		477	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	V	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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