Return to main results Retrieve Phyre Job Id

Job DescriptionP77172
Confidence61.75%DateThu Jan 5 12:25:57 GMT 2012
Rank247Aligned Residues110
% Identity18%Templatec3h1gA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:chemotaxis protein chey homolog; PDBTitle: crystal structure of chey mutant t84a of helicobacter pylori
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   624.....630.........640.........650........ .660.........670.........680.........690.........700.
Predicted Secondary structure 









.













.
Query SS confidence 


































.










































.
Query Sequence  TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARL. KNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVV.
Query Conservation              
   
  
 






 


  
.  
  
 



 
 
            
  
   
      

.
Alig confidence 


















.














.










....



.






















.
Template Conservation 
       
   
   
  . 
       


         
 

 
....  
 .   
      

        


 
Template Sequence  DSSTMRRIIKNTLSRLGYE. DVLEAEHGVEAWEKLDANADTKVLITD. . . . WNMP. EMNGLDLVKKVRSDSRFKEIPIIM
Template Known Secondary structure  S
TT

.
SS
TT


....S

S.SS
TSTT
TT

Template Predicted Secondary structure 




.








....



.









Template SS confidence 















































































   8.10.........20...... ...30.........40.........50... .... ..60.........70.........80.
 
   702.......710.........720.........730.........740...
Predicted Secondary structure 















Query SS confidence 









































Query Sequence  AEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPI
Query Conservation 





      
   
 
  


    
 
           
Alig confidence 




















....
















Template Conservation 

              
    ....
 

     
   
   
Template Sequence  ITAEGGKAEVITALKAGVNNY. . . . IVKPFTPQVLKEKLEVV
Template Known Secondary structure  S

ST

....S


Template Predicted Secondary structure 







....



Template SS confidence 









































   82.......90.........100.. .......110.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions