Return to main results Retrieve Phyre Job Id

Job DescriptionP77172
Confidence78.62%DateThu Jan 5 12:25:57 GMT 2012
Rank160Aligned Residues114
% Identity10%Templatec3grcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:sensor protein, kinase; PDBTitle: crystal structure of a sensor protein from polaromonas sp.2 js666
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   624.....630.........640.........650.........660.........670.........680.........690.........700...
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAE
Query Conservation              
   
  
 






 


  
  
  
 



 
 
            
  
   
      



Alig confidence 


















..
























....




.






















.
Template Conservation 
       
   
   
  ..
        
   
     



 
....     .  
      

          
 .
Template Sequence  DDPDIARLLNLXLEKGGFD. . SDXVHSAAQALEQVARRPYAAXTVD. . . . LNLPD. QDGVSLIRALRRDSRTRDLAIVV.
Template Known Secondary structure  SSTT
..SSTTS

S
....SS
SS.S
STTSTT
.
Template Predicted Secondary structure 




..





....




.








.
Template SS confidence 















































































   555....560.........570... ......580.........590........ .600... ......610.........620......
 
   704.....710.........720.........730.........740......
Predicted Secondary structure 
















Query SS confidence 










































Query Sequence  YVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES
Query Conservation 



      
   
 
  


    
 
              
Alig confidence  .









































Template Conservation  .
                
    
 

     
   
   
  
Template Sequence  . VSANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAIDN
Template Known Secondary structure  .
TTTTT
TTSSS
SS

Template Predicted Secondary structure  .











Template SS confidence 










































   627..630.........640.........650.........660........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions