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Job DescriptionP77172
Confidence76.55%DateThu Jan 5 12:25:57 GMT 2012
Rank175Aligned Residues109
% Identity14%Templatec3dzdA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   624.....630.........640.........650.........660.........670.........680.........690.........700...
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Query Sequence  TNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAE
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Template Sequence  DEESITSSLSAILEEEGYH. . PDTAKTLREAEKKIKELFFPVIVLDVW. . . . . XPDGDGVNFIDFIKE. . NSPDSVVIVI
Template Known Secondary structure  S
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Query Sequence  . YVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRE
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Template Sequence  TGHGSVDTAVKAIKKGAYE. . . . FLEKPFSVERFLLTIKHAFE
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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