Job Description P77172 Confidence 92.62% Date Thu Jan 5 12:25:57 GMT 2012 Rank 47 Aligned Residues 111 % Identity 14% Template c3b2nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:uncharacterized protein q99uf4; PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus Resolution 2.04 Å

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		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	V	K	Q	A	Q	I	T	L	Q	H	L	Q	E	L	G	C	Q	I	A	I	D	D	F	G	T	G	Y	A	S	Y	A	R	L	K	N	V	N	A	D	L	L	K	I	D	G	S	F	I	R	N	I	V	S	N	S	L	D	Y	Q	I	V	A	S	I	C	H	L	A	R	M	K	K	M	L	V	V	A	E
Query Conservation
Alig confidence																																																			.	.	.	.	.																						.
Template Conservation																																																			.	.	.	.	.																						.
Template Sequence		D	Q	N	M	L	R	Q	A	M	V	Q	L	I	K	L	H	G	D	F	E	I	L	A	D	T	D	N	G	L	D	A	M	K	L	I	E	E	Y	N	P	N	V	V	I	L	D	I	E	M	.	.	.	.	.	P	G	M	T	G	L	E	V	L	A	E	I	R	K	K	H	L	N	I	K	V	.	I	I	V	T
Template Known Secondary structure		S																S	S								S															S						S	S		.	.	.	.	.	S	S	S												T	T		S				.
Template Predicted Secondary structure																																																			.	.	.	.	.																						.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.
		704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	E	N	E	E	I	R	E	A	V	L	S	L	G	I	D	Y	M	Q	G	Y	L	I	G	K	P	Q	P	L	I	D	T	L	N	E	I	E	P	I	R
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		T	F	K	R	P	G	Y	F	E	K	A	V	V	N	D	V	D	A	Y	.	.	.	.	V	L	K	E	R	S	I	E	E	L	V	E	T	I	N	K	V	N
Template Known Secondary structure		S													T	T		S			.	.	.	.			T	T	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions