 |
Job Description | P77172 | Confidence | 35.47% | Date | Thu Jan 5 12:25:57 GMT 2012 |
Rank | 378 | Aligned Residues | 78 |
% Identity | 10% | Template | c3a23A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:putative secreted alpha-galactosidase; |
PDBTitle: crystal structure of beta-l-arabinopyranosidase complexed with d-2 galactose
|
Resolution | 1.90 Å |
|
 |
  |   |
629 | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | |
|
. | . | . | . | . | . | . | 680 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | I | T | L | Q | H | L | Q | E | L | G | C | Q | I | A | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | D | F | G | T | G | Y | A | S | Y | A | R | L | K | N | V | N | A | D | L | L | K | I | D | G | S | F | . |
. |
I | R | N | I | V | S | N | S | L | D | Y |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |
|   | . | . |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |
|
|   |   |
|
|
|   |
|
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
M | S | A | I | T | A | Y | I | H | S | K | G | L | K | A | G | I | Y | T | D | A | G | K | D | G | C | G | Y | Y | Y | P | T | G | R | P | A | A | P | G | S | G | S | E | G | H | Y | D | Q | D | M | L | Q | F | S | T | W | G | F | D | F | V | K | V | D | W | C | G | G | D | A | E | G | L | D | A | A | T | T | Y | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  | S | S | S | S |
|  |  |  |  | S |
| S | S | S |
|
|
| T | T |
| S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
  |
  |   |
684 | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | I | V | A | S | I | C | H | L | A | R | M | K | K | M | L | V | V | A | E | Y | V | E |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |
|   |   |
|   |   |   |
Template Sequence |   |
S | I | S | D | A | V | G | R | A | A | A | T | T | G | R | P | L | T | L | S | I | C | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|