Return to main results Retrieve Phyre Job Id

Job DescriptionP77172
Confidence89.56%DateThu Jan 5 12:25:57 GMT 2012
Rank74Aligned Residues115
% Identity13%Templatec2yxbA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:coenzyme b12-dependent mutase; PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   624.....630.........640... ......650.........660.........670.........680.........690.........700..
Predicted Secondary structure 




.


















Query SS confidence 



















.


























































Query Sequence  TNVKQAQITLQHLQELGCQI. AIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVA
Query Conservation              
   
  
. 






 


  
  
  
 



 
 
            
  
   
      


Alig confidence 



















.

























....




























Template Conservation   
  
   
   
   
 

  

                 


 

....  
             
        



Template Sequence  GHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAXAAVQEDVDVIGVS. . . . ILNGAHLHLXKRLXAKLRELGADDIPVVL
Template Known Secondary structure  S

TT



SB

TT
S....SSS
TT
TTS
Template Predicted Secondary structure 












....










Template SS confidence 















































































   32.......40.........50.........60.........70........ .80.........90.........100.......
 
   703......710.........720.........730.........740......
Predicted Secondary structure 
















Query SS confidence 











































Query Sequence  EYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRES
Query Conservation 




      
   
 
  


    
 
              
Alig confidence 



















....



















Template Conservation 

             
 
  ....  

    

   
      
Template Sequence  GGTIPIPDLEPLRSLGIREI. . . . FLPGTSLGEIIEKVRKLAEE
Template Known Secondary structure 


TT

....
TT

Template Predicted Secondary structure 






....




Template SS confidence 











































   108.110.........120....... ..130.........140.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions