 |
Job Description | P77172 | Confidence | 23.33% | Date | Thu Jan 5 12:25:57 GMT 2012 |
Rank | 465 | Aligned Residues | 97 |
% Identity | 11% | Template | c2yciX_ |
PDB info |
PDB header:transferase | Chain: X: PDB Molecule:5-methyltetrahydrofolate corrinoid/iron sulfur protein |
PDBTitle: methyltransferase native
|
Resolution | 1.78 Å |
|
 |
  |   |
594 | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | P | V | E | V | S | Q | L | L | A | K | Y | Q | I | E | A | W | Q | L | I | F | E | V | T | E | S | N | A | L | T | N | V | K | Q | A | Q | I | T | L | Q | H | L | Q | E | L | . |
. |
. |
. |
. |
. |
G | C | Q | I | A | I | D | D | F | G | T | G | Y | A | S | Y | A | R | L | K | N | V | N | A | D | L | L | K |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . |
|   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   | . | . | . | . | . |
|   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
Q | L | A | M | E | L | V | A | N | A | D | A | H | G | I | P | M | T | E | L | Y | I | D | P | L | I | L | P | V | N | V | A | Q | E | H | A | V | E | V | L | E | T | I | R | Q | I | K | L | M | A | N | P | A | P | R | T | V | L | . |
. |
. |
. |
. |
G | L | S | N | V | S | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |
|
|
|
|
| T | T | T | S | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | S |
|
|  |  |  |  | . | . | . | . | . |  | G | G | G | G | G | T | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 200 | . | . | . | |
|
|
|
|
|
|
|
|
|
  |
  |   |
668 | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | G | S | F | I | R | N | I | V | S | N | S | L | D | Y | Q | I | V | A | S | I | C | H | L | A | R | M | K | K | M | L | V | V | A | E | Y | V | E | N | E | E | I | R | E | A | V | L |
Query Conservation |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . |
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | C | P | D | R | P | L | I | N | R | T | Y | L | V | M | A | M | T | A | G | L | D | A | A | I | M | D | V | D | D | D | A | L | V | D | A | A | A |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|