Job Description P77172 Confidence 22.20% Date Thu Jan 5 12:25:57 GMT 2012 Rank 483 Aligned Residues 147 % Identity 10% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		11	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.								.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure										.	.	.											.	.	.	.	.	.	.																									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.											.	.	.	.	.	.	.																									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	D	K	W	W	G	L	P	.	.	.	L	F	L	P	S	L	I	L	P	I	.	.	.	.	.	.	.	F	A	H	I	N	T	F	A	H	I	S	S	G	E	V	F	L	F	Y	L	P	L	A	L	.	M	I	S	M	M	M	F	F	S	W	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.	.	.											.	.	.	.	.	.	.																									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.											.	.	.	.	.	.	.																									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	K	V	S	S	F	I	L	L	S	A	L	W	L	T	F	V	Y	A	P	F	A	H	W	L	W	G	G	G	W	L	A	K	L	G	A	L	D	F	A	G	G	M	V	V	H	I	S	S	G	F	A	A	L	A	V	A	M	T	I	G	K	R	A	G	F	E	E	Y	S	I	E	P	H	S	I	P	L	T
Template Known Secondary structure		T	B																T										S	S						T	T				S	S		T	T	T	T																			T	T	T	T	T	S					S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
					65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	P	G	I	A	L	G	I	F	V	R	K	Y	A	E	L	G	F	Y	E	T	L	S	L	T	A	N	F	I	I	I	I	I	L	C	W	G	G	Y	R	V	F	T	P	R	R	N	N	V	S	H	G	D	T	R	L	I	S	Q	R	I	F	W	Q	I	V	F	P	A	T	L	F	L	I	L	F	Q
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		L	I	G	A	A	L	L	W	F	G	W	F	G	F	N	G	G	S	A	L	A	A	N	D	V	A	I	N	A	V	V	V	T	N	T	S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K	G	K	P	G	S	L	G	I	V	S	G	A	I	A	G	L	A	A	I	T	P	A	A	G	F	V	D	V	K
Template Known Secondary structure																		G	G	G	S	S	S	S																													S																			T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	F	V	G	L	L	A	S	R	E	N	L	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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