Return to main results Retrieve Phyre Job Id

Job DescriptionP77172
Confidence25.26%DateThu Jan 5 12:25:57 GMT 2012
Rank451Aligned Residues104
% Identity12%Templatec1o4uA_
PDB info PDB header:transferaseChain: A: PDB Molecule:type ii quinolic acid phosphoribosyltransferase; PDBTitle: crystal structure of a nicotinate nucleotide pyrophosphorylase2 (tm1645) from thermotoga maritima at 2.50 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   621........630.........640.........650.........660.........670.........680.........690.........700
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  NALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLV
Query Conservation                 
   
  
 






 


  
  
  
 



 
 
            
  
   
      
Alig confidence 

























..





















.......
















.




Template Conservation     
    

   
        
 

..
 
  

  
   


 
 

 .......     
      
    .  
 
Template Sequence  KMYGSAERAVQEVRKIIPFTTKIEVE. . VENLEDALRAVEAGADIVMLDN. . . . . . . LSPEEVKDISRRIKDIN. PNVIV
Template Known Secondary structure  SSTTS
TTS
..SSTT
SS.......


.TTS
Template Predicted Secondary structure 




..







.......


.


Template SS confidence 















































































   162.......170.........180....... ..190.........200......... 210.........220...... ...230.
 
   701........710.........720 .........730....
Predicted Secondary structure 






.








Query SS confidence 



















.













Query Sequence  VAEYVENEEIREAVLSLGID. YMQGYLIGKPQPLI
Query Conservation 






      
   
 
.  


    
 
  
Alig confidence 



















.













Template Conservation   




    
      


 
 



   
   
Template Sequence  EVSGGITEENVSLYDFETVDVISSSRLTLQEVFVD
Template Known Secondary structure 


TTTGGGG

TT

GGGTSS




Template Predicted Secondary structure 











Template SS confidence 


































   232.......240.........250.........260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions