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Job DescriptionP37440
Confidence100.00%DateThu Jan 5 11:55:36 GMT 2012
Rank3Aligned Residues249
% Identity33%Templatec3toxG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase in complex with2 nad(p) from sinorhizobium meliloti 1021
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60.........70.........80
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Query Sequence  GKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPE. IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE
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Template Sequence  SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF
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TTTT
SSTTSTT
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TTT



TT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
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Query Sequence  GRIDILVNNAGVC. RLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK
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Template Sequence  GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASK
Template Known Secondary structure  SS







S
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GGG

TT


SBTTTB

TT
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   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  AAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDES
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Template Sequence  AGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLA. . . . . . . PETRGFVEGLHALKRIARPEEIAEAALYLASDGA
Template Known Secondary structure  TTT
SBSSTTSGGG

.......TTTSTTSS
B
SGGG
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   164.....170.........180.........190.........200.. .......210.........220.........230......
 
   240.........250.......
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Query Sequence  SYLTGTQNVIDGGSTLPE
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Template Sequence  SFVTGAALLADGGASVTK
Template Known Secondary structure  TT

S
STTGGG

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   240.........250.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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