Return to main results Retrieve Phyre Job Id

Job DescriptionP37440
Confidence100.00%DateThu Jan 5 11:55:36 GMT 2012
Rank2Aligned Residues254
% Identity37%Templatec3rihB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain dehydrogenase or reductase; PDBTitle: crystal structure of a putative short chain dehydrogenase or reductase2 from mycobacterium abscessus
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50. ........60.........70........
Predicted Secondary structure 















..





















Query SS confidence 








































.









.


























Query Sequence  MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPE. IEKLADELCG. RGHRCTAVVADVRDPASVAAAIKRAKE
Query Conservation 
  
 













 


  
   
  
    
   .          .          
                
Alig confidence 








































.









.


























Template Conservation     
 

 






 


 
 
  

  

 


  
           
             
                
Template Sequence  MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD
Template Known Secondary structure  TT

TT
TTTTSTT
SSGGGGTTSSSS


TT
Template Predicted Secondary structure 





































Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 




































































Query SS confidence 















































































Query Sequence  KEGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALT
Query Conservation                                                            
   
             
  
Alig confidence 















































































Template Conservation                                                            
    
            
  
Template Sequence  AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGAS
Template Known Secondary structure  S











TTT

TTSS


SBTTTB

TT
Template Predicted Secondary structure 




























































Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   159160.........170.........180.........190.........200.........210.........220.........230........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  KAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDE
Query Conservation 
          
 
     



 
 

 
 
 
                        
 

   
 


     
 
  
Alig confidence 






































........
































Template Conservation 
 
        
 
     



 
 

 
 
       ........           
  
   




  
  
 
  
Template Sequence  KAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG. . . . . . . . EEYISGMARSIPMGMLGSPVDIGHLAAFLATDE
Template Known Secondary structure  GGGT

SB

TT
........TT
TTSS
B
SGG
Template Predicted Secondary structure 






















........









Template SS confidence 















































































   174.....180.........190.........200.........210.. .......220.........230.........240.....
 
   239240.........250...... ...260..
Predicted Secondary structure 












..





Query SS confidence 

















. .





Query Sequence  SSYLTGTQNVIDGGSTLP. . ETVSVG
Query Conservation 
  


  
 



  

..      
Alig confidence 

















..





Template Conservation     


  
 



  
         
Template Sequence  AGYITGQAIVVDGGQVLPESPDAVNP
Template Known Secondary structure  GTT

S
STTTT

SSGGGS

Template Predicted Secondary structure 




















Template SS confidence 

























   246...250.........260.........270.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions