Job Description P37440 Confidence 99.35% Date Thu Jan 5 11:55:36 GMT 2012 Rank 210 Aligned Residues 205 % Identity 16% Template c3rfxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:uronate dehydrogenase; PDBTitle: crystal structure of uronate dehydrogenase from agrobacterium2 tumefaciens, y136a mutant complexed with nad Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	A	L	I	T	G	A	L	Q	G	I	G	E	G	I	A	R	T	F	A	R	H	G	A	N	L	I	L	L	D	I	S	P	E	I	E	K	L	A	D	E	L	C	G	R	G	H	R	C	T	A	V	V	A	D	V	R	D	P	A	S	V	A	A	A	I	K	R	A	K	E	K	E	G	R	I	D	I	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		K	R	L	L	V	T	G	A	A	G	Q	L	G	R	V	M	R	E	R	L	A	P	M	A	E	I	L	R	L	A	D	L	S	P	L	.	.	.	.	.	.	.	.	D	P	A	G	P	N	E	E	C	V	Q	C	D	L	A	D	A	N	.	.	.	.	.	.	.	A	V	N	A	M	V	A	G	C	D	G	I
Template Known Secondary structure								S	T	T	S										T	G	G	G									S	S			.	.	.	.	.	.	.	.					T	T								T	T				.	.	.	.	.	.	.							T	T		S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	N	A	G	V	C	R	L	G	S	F	L	D	M	S	D	D	D	R	D	F	H	I	D	I	N	I	K	G	V	W	N	V	T	K	A	V	L	P	E	M	I	A	R	K	D	G	R	I	V	M	M	S	S	V	T	G	D	M	V	A	D	P	G	E	T	A	Y	A	L	T	K	A	A	I	V	G	L	T
Query Conservation
Alig confidence																																																																			.
Template Conservation																																																																			.
Template Sequence		V	H	L	G	G	I	S	V	E	K	P	F	E	Q	I	L	Q	G	N	I	I	G	L	Y	N	L	Y	E	A	A	R	A	H	G	Q	P	R	I	V	F	A	S	S	N	H	T	I	G	Y	Y	P	Q	T	E	R	L	G	P	D	V	P	A	R	P	D	.	G	L	A	G	V	S	K	C	F	G	E	N	L	A
Template Known Secondary structure						S			S												T													T	T										G	G	G	G	T	T	S	B	T	T	S		B		T	T							.	S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	L	A	V	E	Y	A	Q	S	G	I	R	V	N	A	I	C	P	G	Y	V	R	T	P	M	A	E	S	I	A	R	Q	S	N	P	E	D	P	E	S	V	L	T	E	M	A	K	A	I	P	M	R	R	L	A	D	P	L	E	V	G	E	L	A	A	F	L	A	S	D	E	S	S	Y	L	T	G	T	Q
Query Conservation
Alig confidence									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		R	M	Y	F	D	K	F	.	.	.	G	Q	E	T	A	L	V	R	I	G	S	C	T	P	E	P	N	N	Y	R	M	L	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	F	S	H	D	D	F	V	S	L	I	E	A	V	F	.	.	R	A	P	V	L	G	C	P	V
Template Known Secondary structure									.	.	.											B		S	S	S			S	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B															.	.			S				S
Template Predicted Secondary structure									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		148	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.																					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.
		247	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	I	D	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	W	G	A	S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions