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Job DescriptionP37440
Confidence100.00%DateThu Jan 5 11:55:36 GMT 2012
Rank157Aligned Residues235
% Identity31%Templatec3p19A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative blue fluorescent protein; PDBTitle: improved nadph-dependent blue fluorescent protein
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE
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Template Sequence  MK. . . . KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLK. . . . . ALNLPNTLCAQVDVTDKYTFDTAITRAEKIY
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STTSTT

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   1. .......10.........20.........30.........40 .........50.........60.........70.
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  GRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA
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Template Sequence  GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAG. KKTFPDHAAYCGTKF
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   72.......80.........90.........100.........110.........120.........130..... ....140.........150
 
   161........170.........180.........190.........200.........210.........220.........230...... ...
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Query Sequence  AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLAS. DES
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Template Sequence  AVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQ. . . . . . QIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQN
Template Known Secondary structure  GGGT

SBSSSGGGG
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   151........160.........170.........180......... 190.........200.........210.........220....
 
   240.........250.
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Query Sequence  SYLTGTQNVIDG
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Template Sequence  VCIREIALAPTK
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   225....230......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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