Job Description P37440 Confidence 99.53% Date Thu Jan 5 11:55:36 GMT 2012 Rank 205 Aligned Residues 218 % Identity 15% Template c3nzoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:udp-n-acetylglucosamine 4,6-dehydratase; PDBTitle: udp-n-acetylglucosamine 4,6-dehydratase from vibrio fischeri. Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																													.												.
Query SS confidence																													.												.
Query Sequence		L	T	G	K	T	A	L	I	T	G	A	L	Q	G	I	G	E	G	I	A	R	T	F	A	R	H	G	.	A	N	L	I	L	L	D	I	S	P	E	.	I	E	K	L	A	D	E	L	C	G	R	G	H	R	C	T	A	V	V	A	D	V	R	D	P	A	S	V	A	A	A	I	K	R	A	K	E	K	E	G
Query Conservation																													.												.
Alig confidence																													.												.
Template Conservation
Template Sequence		V	S	Q	S	R	F	L	V	L	G	G	A	G	S	I	G	Q	A	V	T	K	E	I	F	K	R	N	P	Q	K	L	H	V	V	D	I	S	E	N	N	X	V	E	L	V	R	D	I	R	S	S	F	G	Y	I	N	G	D	F	Q	T	F	A	L	D	I	G	S	I	E	Y	D	A	F	I	K	A	D	G	Q
Template Known Secondary structure				T							T	T	T	S												T	T			S							S																				S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	D	I	L	V	N	N	A	G	V	C	R	L	G	S	F	L	D	M	S	D	D	D	R	D	F	H	I	D	I	N	I	K	G	V	W	N	V	T	K	A	V	L	P	E	M	I	A	R	K	D	G	R	I	V	M	M	S	S	V	T	G	D	M	V	A	D	P	G	E	T	A	Y	A	L	T	K	A	A
Query Conservation
Alig confidence																.	.	.																														.	.	.	.																.	.	.	.
Template Conservation																.	.	.																														.	.	.	.																.	.	.	.
Template Sequence		Y	D	Y	V	L	N	L	S	A	L	K	H	V	R	.	.	.	S	E	K	D	P	F	T	L	X	R	X	I	D	V	N	V	F	N	T	D	K	T	I	Q	Q	S	I	D	A	.	.	.	.	G	A	K	K	Y	F	C	V	S	T	D	K	A	A	N	.	.	.	.	P	V	N	X	X	G	A	S	K	R	I
Template Known Secondary structure			S											G	G	.	.	.	G	G	S	S												T													T	.	.	.	.	T		S								S		S	S		.	.	.	.			S
Template Predicted Secondary structure																.	.	.																														.	.	.	.																.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		I	V	G	L	T	K	S	L	A	V	E	Y	A	Q	S	G	I	R	V	N	A	I	C	P	G	Y	V	R	T	P	M	A	E	S	I	A	R	Q	S	N	P	E	D	P	E	S	V	L	T	E	M	A	K	A	I	P	M	R	R	.	L	A	D	P	L	E	V	G	E	L	A	A	F	L	A	S	D	E	S	S
Query Conservation																																																													.
Alig confidence												.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																.	.	.
Template Conservation												.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Sequence		X	E	X	F	L	X	R	K	S	E	.	.	.	.	.	E	I	A	I	S	T	A	R	F	A	N	V	A	F	S	D	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	Q	K	N	Q	P	I	K	R	Y	F	V	T	P	Q	E	S	G	E	L	C	L	X	S	C	.	.	.	I	F
Template Known Secondary structure										T	T	.	.	.	.	.	T	S										B	T	T		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T								B														.	.	.
Template Predicted Secondary structure												.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	T	G	T	Q	N	V	I	D	G	G	S	T	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	N	R	D	I	F	F	P	K	D	X	A	R	F	D
Template Known Secondary structure				T	T									S	S		S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions