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Job DescriptionP37440
Confidence100.00%DateThu Jan 5 11:55:36 GMT 2012
Rank49Aligned Residues244
% Identity32%Templatec3nugA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-(acyl-carrier protein) reductase; PDBTitle: crystal structure of wild type tetrameric pyridoxal 4-dehydrogenase2 from mesorhizobium loti
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  KLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR
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Template Sequence  RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAA. . ASIGKKARAIAADISDPGSVKALFAEIQALTGG
Template Known Secondary structure  TTTT
TTTTSTT


SS..
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TT
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   4.....10.........20.........30.........40........ .50.........60.........70.........80.
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  IDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAI
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Template Sequence  IDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGV
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GGG

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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  VGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESSYL
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Template Sequence  IGFTRALATELGKYNITANAVTPGLIESDGVKASPH. . . . . . . NEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWI
Template Known Secondary structure  GGGT
SB

TSGG.......GGGSSS
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B
SGGGTT
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   162.......170.........180.........190....... ..200.........210.........220.........230....
 
   243......250.....
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Query Sequence  TGTQNVIDGGSTL
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Template Sequence  TGQTLNVDAGMVR
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STTSS
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   235....240.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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