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Job DescriptionP37440
Confidence100.00%DateThu Jan 5 11:55:36 GMT 2012
Rank153Aligned Residues245
% Identity30%Templatec3m1aF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:putative dehydrogenase; PDBTitle: the crystal structure of a short-chain dehydrogenase from2 streptomyces avermitilis to 2a
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  KTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDIL
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Template Sequence  KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTE. . ALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL
Template Known Secondary structure 
TTTTSTT
SSGG..GG
TTT

TT
S

S
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   6...10.........20.........30.........40 .........50.........60.........70.........80...
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  VNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLT
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Template Sequence  VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQXRERGSGSVVNISSFGG. QLSFAGFSAYSATKAALEQLS
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GGG

TT


GGG.T


TT
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   84.....90.........100.........110.........120.........130.........140. ........150.........160..
 
   167..170.........180.........190.........200.........210.........220.........230.. ..
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Query Sequence  KSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAA. . . . . . . . . . . . FL
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Template Sequence  EGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQQPGDPAKAAAAIRLALDTEKTPLRLAL
Template Known Secondary structure  GGGT

B

TTT







TTT


B
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S
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   235....240.........250....
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Query Sequence  ASDESSYLTGTQNVIDGGST
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Template Sequence  GGDAVDFLTGHLDSVRAELT
Template Known Secondary structure  S
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   248.250.........260.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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