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Job DescriptionP37440
Confidence100.00%DateThu Jan 5 11:55:36 GMT 2012
Rank47Aligned Residues247
% Identity27%Templatec3ijrF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: 2.05 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex3 with nad+
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60.........70.........
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Query Sequence  GKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPE. . IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK
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Template Sequence  EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ
Template Known Secondary structure  STTTT
TTTSTT
SS
TTTS
S
TTS
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   40.........50.........60.........70.........80.........90.........100.........110.........
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  EGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK
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Template Sequence  LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHV. . TKAALSHLKQGDVIINTASIVAYEGNETLIDYSATK
Template Known Secondary structure  S










SSGGG

T..TT

TT


T

TT
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   120.........130.........140.........150.........160. ........170.........180.........190.......
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  AAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDES
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Template Sequence  GAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD. . . . . . . EKKVSQFGSNVPXQRPGQPYELAPAYVYLASSDS
Template Known Secondary structure  GGGT

SB
STTTTTTS
.......TTTTTTSTTSS
B
GGGTSGGG
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   198.200.........210.........220.........230...... ...240.........250.........260.........270
 
   240.........250.......
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Query Sequence  SYLTGTQNVIDGGSTLPE
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Template Sequence  SYVTGQXIHVNGGVIVNG
Template Known Secondary structure  TT

S
SSS




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   271........280........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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