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Job DescriptionP37440
Confidence100.00%DateThu Jan 5 11:55:36 GMT 2012
Rank132Aligned Residues227
% Identity24%Templatec3i1jB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:oxidoreductase, short chain PDBTitle: structure of a putative short chain dehydrogenase from2 pseudomonas syringae
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60. ........70.......
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Query Sequence  GKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPE. IEKLADELCGRGHRCTAVVA. . . DVRDPASVAAAIKRAK
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Template Sequence  ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE
Template Known Secondary structure  TTTTT
S
SSTT
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TTT

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   910.........20.........30.........40.........50.........60.........70.........80........
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  EKEGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYAL
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Template Sequence  HEFGRLDGLLHNASIIGPRTPLEQLPDEDFXQVXHVNVNATFXLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGV
Template Known Secondary structure  S










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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   158.160.........170... ......180.........190.........200.........210.........220.........230......
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Query Sequence  TKAAIVGLTKSLAVEY. AQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLAS
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Template Sequence  SKFATEGLXQTLADELEGVTAVRANSINPGATRTGXRAAY. . . . . . . . . . . . . . . . . . . NPLNNPA. PEDIXPVYLYLXG
Template Known Secondary structure  TTTSS

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   169170.........180.........190.........200........ .210..... ....220........
 
   237..240........
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Query Sequence  DESSYLTGTQNV
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Template Sequence  PDSTGINGQALN
Template Known Secondary structure  GGGTT

S
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   233......240....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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