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Job DescriptionP37440
Confidence100.00%DateThu Jan 5 11:55:36 GMT 2012
Rank69Aligned Residues237
% Identity36%Templatec3ftpD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40. ........50.........60.........70.........80.
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Query Sequence  KLTGKTALITGALQGIGEGIARTFARHGANLILLDISPE. IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG
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Template Sequence  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG
Template Known Secondary structure  TTTT
S
SSTT
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TT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  RIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAA
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Template Sequence  ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVG. SAGNPGQVNYAAAKAG
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GGG

TT



T.

TT
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   84.....90.........100.........110.........120.........130.........140...... ...150.........160..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  IVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESSY
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Template Sequence  VAGMTRALAREIGSRGITVNCVAPGFIDTDEQQ. . . . . . . . . . . . . . . TALKTQIPLGRLGSPEDIAHAVAFLASPQAGY
Template Known Secondary structure  GGGT

SB




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SGGGTT
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   163......170.........180.........190..... ....200.........210.........220.......
 
   242.......250.....
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Query Sequence  LTGTQNVIDGGSTL
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Template Sequence  ITGTTLHVNGGMFM
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   235....240........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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