Job Description P37440 Confidence 100.00% Date Thu Jan 5 11:55:36 GMT 2012 Rank 133 Aligned Residues 211 % Identity 35% Template c3edmD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from agrobacterium2 tumefaciens Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		K	L	T	G	K	T	A	L	I	T	G	A	L	Q	G	I	G	E	G	I	A	R	T	F	A	R	H	G	A	N	L	I	L	L	D	I	S	P	E	.	I	E	K	L	A	D	E	L	C	G	R	G	H	R	C	T	A	V	V	A	D	V	R	D	P	A	S	V	A	A	A	I	K	R	A	K	E	K	E	G
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		R	F	T	N	R	T	I	V	V	A	G	A	G	R	D	I	G	R	A	C	A	I	R	F	A	Q	E	G	A	N	V	V	L	T	Y	N	G	A	E	G	A	A	T	A	V	A	E	I	E	K	L	G	R	S	A	L	A	I	K	A	D	L	T	N	A	A	E	V	E	A	A	I	S	A	A	A	D	K	F	G
Template Known Secondary structure		T	T	T	T							S		S	S													T	T																						T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	D	I	L	V	N	N	A	G	V	C	R	L	G	S	F	L	D	M	S	D	D	D	R	D	F	H	I	D	I	N	I	K	G	V	W	N	V	T	K	A	V	L	P	E	M	I	A	R	K	D	G	R	I	V	M	M	S	S	V	T	G	D	M	V	A	D	P	G	E	T	A	Y	A	L	T	K	A	A
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		E	I	H	G	L	V	H	V	A	G	G	L	I	A	R	K	T	I	A	E	M	D	E	A	F	W	H	Q	V	L	D	V	N	L	T	S	L	F	L	T	A	K	T	A	L	P	K	M	.	A	K	G	G	A	I	V	T	F	S	S	Q	A	G	R	D	G	G	G	P	G	A	L	A	Y	A	T	S	K	G	A
Template Known Secondary structure		S																	T	T	T														T											G	G	G		.																			S	T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	G	L	T	K	S	L	A	V	E	Y	A	Q	S	G	I	R	V	N	A	I	C	P	G	Y	V	R	T	P	M	A	E	S	I	A	R	Q	S	N	P	E	D	P	E	S	V	L	T	E	M	A	K	A	I	P	M	R	R	L	A	D	P	L	E	V	G	E	L	A	A	F	L	A	S	D	E	S	S	Y
Query Conservation
Alig confidence																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	M	T	F	T	R	G	L	A	K	E	V	G	P	.	K	I	R	V	N	A	V	C	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	E	D	V	A	G	L	V	A	F	L	A	S	D	D	A	A	Y
Template Known Secondary structure														T	T	.	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S	G	G	G	T	T
Template Predicted Secondary structure																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.																																					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	G	T	Q	N	V	I	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	G	A	C	Y	D	I	N	G
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions