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Job DescriptionP37440
Confidence99.03%DateThu Jan 5 11:55:36 GMT 2012
Rank220Aligned Residues201
% Identity15%Templatec3e8xA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative nad-dependent epimerase/dehydratase; PDBTitle: putative nad-dependent epimerase/dehydratase from bacillus halodurans.
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  GKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI
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Template Sequence  GXRVLVVGANGKVARYLLSELKNKGHEPVAXVRNEEQGPELRERGAS. . . . . . . . . . . . . . . . . . . . . . . . . DIVVANLE
Template Known Secondary structure 

TTTSTT
SSGGGTT
S.........................

TT
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   0.........10.........20.........30.........40...... ...50....
 
   86...90.........100.........110.........120.........130.........140.... .....150.........160...
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Query Sequence  LVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTG. . DMVADPGETAYALTKAAIV
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Template Sequence  EDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIXVSSVGTVDPDQGPXNXRHYLVAKRLAD
Template Known Secondary structure  S

GGGGTT
S




TTS
TTTT



TT
S
GGGS
GGG
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   55....60.........70.........80.........90.........100.........110.........120.........130....
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  GLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESSYLT
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Template Sequence  DELKR. . . . . . . SSLDYTIVRPGPLSNEESTGKVTVSPHFSE. . . . . . . . . . . . ITRSITRHDVAKVIAELV. . DQQHTI
Template Known Secondary structure  .......SSS
S
S


SSS
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T..T
GGGT
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   135.... 140.........150.........160......... 170.........180....... ..190...
 
   244.....250..
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Query Sequence  GTQNVIDGG
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Template Sequence  GKTFEVLNG
Template Known Secondary structure  T
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   194.....200..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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