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Job DescriptionP37440
Confidence100.00%DateThu Jan 5 11:55:36 GMT 2012
Rank21Aligned Residues239
% Identity34%Templatec3cxtA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dehydrogenase with different specificities; PDBTitle: quaternary complex structure of gluconate 5-dehydrogenase from2 streptococcus suis type 2
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40. ........50.........60.........70.........80.
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Query Sequence  KLTGKTALITGALQGIGEGIARTFARHGANLILLDISPE. IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG
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Template Sequence  SLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVG
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TT
T
SSTT
SSTT




TT
T
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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  RIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAA
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Template Sequence  IIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMS. ELGRETVSAYAAAKGG
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GGGS
TT


GGG.T


TT
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   91........100.........110.........120.........130.........140.........150... ......160.........
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  IVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESSY
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Template Sequence  LKMLTKNIASEYGEANIQCNGIGPGYIATPQTHPF. . . . . . . . . . . . DQFIIAKTPAARWGEAEDLMGPAVFLASDASNF
Template Known Secondary structure  GGGT
SB

TT

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TT
S
B
SGGGTT
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   170.........180.........190.........200.... .....210.........220.........230.......
 
   242.......250....
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Query Sequence  LTGTQNVIDGGST
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Template Sequence  VNGHILYVDGGIL
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STTGG
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   250.........260..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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