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Job DescriptionP37440
Confidence100.00%DateThu Jan 5 11:55:36 GMT 2012
Rank48Aligned Residues247
% Identity27%Templatec3afnC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:carbonyl reductase; PDBTitle: crystal structure of aldose reductase a1-r complexed with nadp
Resolution1.63 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50.........60.........70........
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Query Sequence  MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPE. . IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKE
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Template Sequence  FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA
Template Known Secondary structure 
GGGTT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   7980.........90.........100.........110........ .120.........130.........140.........150..
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Query Sequence  KEGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVW. . . . . . NVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGE
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Template Sequence  KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGA
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
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Query Sequence  TAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAA
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Template Sequence  GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT. . . . . . . . QDVRDRISNGIPMGRFGTAEEMAPAFL
Template Known Secondary structure  GGGT
SBSSGGGTT

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   162.......170.........180.........190.........200...... ...210.........220.........230...
 
   233...... 240.........250.....
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Query Sequence  FLASDES. SYLTGTQNVIDGGSTL
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Template Sequence  FFASHLASGYITGQVLDINGGQYK
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   234.....240.........250.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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