Job Description P37440 Confidence 98.11% Date Thu Jan 5 11:55:36 GMT 2012 Rank 278 Aligned Residues 229 % Identity 7% Template c3a1nB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ndp-sugar epimerase; PDBTitle: crystal structure of l-threonine dehydrogenase from2 hyperthermophilic archaeon thermoplasma volcanium Resolution 2.07 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	I	T	G	A	L	Q	G	I	G	E	G	I	A	R	T	F	A	R	H	G	A	N	L	I	L	L	D	I	S	P	E	I	E	K	L	A	D	E	L	C	G	R	G	H	R	C	T	A	V	V	A	D	V	R	D	P	A	S	V	A	A	A	I	K	R	A	K	E	K	E	G	R	I	D	I	L	V
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Sequence		M	I	L	V	T	G	S	S	G	Q	I	G	T	E	L	V	P	Y	L	A	E	K	Y	G	K	K	N	V	I	A	S	D	I	V	.	.	.	.	.	.	.	.	Q	R	D	T	G	G	I	K	F	I	T	L	D	V	S	N	R	D	E	I	D	R	A	V	E	K	Y	.	.	.	.	.	.	S	I	D	A	I
Template Known Secondary structure							T	T	T	S																G	G	G						S	S	.	.	.	.	.	.	.	.					T	T								T	T												T	.	.	.	.	.	.	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.									.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	A	G	V	C	R	L	G	S	F	L	D	M	S	D	D	D	R	D	F	H	I	D	I	N	I	K	G	V	W	N	V	T	K	A	V	L	P	E	M	I	A	R	K	D	G	R	I	V	M	M	S	S	V	T	G	D	M	V	A	D	P	G	E	T	A	Y	A	L	T	K	A	A	I	V	G	L	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	H	L	A	G	I	L	S	A	K	G	E	K	D	P	A	L	A	Y	K	V	N	M	N	G	T	Y	N	I	L	E	A	A	K	Q	H	R	V	E	K	V	V	I	P	S	T	I	G	V	F	G	P	E	T	P	K	N	K	V	P	S	I	T	I	T	R	P	R	T	M	Y	G	V	T	K	I	A	A	E	L
Template Known Secondary structure																																					T	T										G	G	G			T	T	S		S	S	S	B		S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.										.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.
Query Sequence		S	L	A	V	E	Y	A	Q	S	G	I	R	V	N	A	I	C	P	G	Y	V	R	T	P	M	A	E	S	I	A	R	Q	S	N	P	E	D	P	E	S	V	L	T	E	M	A	K	A	I	P	M	R	R	L	A	D	P	.	.	.	.	.	.	.	.	.	L	E	V	G	E	L	A	A	F	L	A	S	D	E
Query Conservation																																																											.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																																.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		L	G	Q	Y	Y	Y	E	K	F	G	L	D	V	R	S	L	R	Y	P	G	I	I	S	Y	.	.	K	A	E	P	T	A	G	T	T	D	Y	A	V	E	I	F	Y	Y	A	V	K	R	E	K	Y	K	C	Y	L	A	P	N	R	A	L	P	M	M	Y	M	P	D	A	L	K	A	L	V	D	L	Y	E	A	D
Template Known Secondary structure																									S	.	.	S	S						T	T	T											T	T						S	S		T	T																					S
Template Predicted Secondary structure																										.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	Y	L	T	G	T	Q	N	V	I	D	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	K	L	V	L	R	N	G	Y	N	V	T	A
Template Known Secondary structure		T	T	T		S	S								S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions