Job Description P37440 Confidence 99.43% Date Thu Jan 5 11:55:36 GMT 2012 Rank 208 Aligned Residues 234 % Identity 16% Template c2uv9B_ PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase alpha subunits; PDBTitle: crystal structure of fatty acid synthase from thermomyces2 lanuginosus at 3.1 angstrom resolution. this file contains3 the alpha subunits of the fatty acid synthase. the entire4 crystal structure consists of one heterododecameric fatty5 acid synthase and is described in remark 400 Resolution 3.1 Å

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		4	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure												.																				.								.	.	.	.	.
Query SS confidence												.																				.								.	.	.	.	.
Query Sequence		L	T	G	K	T	A	L	I	T	G	.	A	L	Q	G	I	G	E	G	I	A	R	T	F	A	R	H	G	A	N	.	L	I	L	L	D	I	S	.	.	.	.	.	P	E	I	E	K	L	A	D	E	L	C	G	R	G	H	R	C	T	A	V	V	A	D	V	R	D	P	A	S	V	A	A	A	I	K	R	A
Query Conservation												.																				.								.	.	.	.	.
Alig confidence												.																				.								.	.	.	.	.
Template Conservation
Template Sequence		F	Q	G	K	H	A	L	M	T	G	A	G	A	G	S	I	G	A	E	V	L	Q	G	L	L	S	G	G	A	K	V	I	V	T	T	S	R	F	S	R	Q	V	T	E	Y	Y	Q	G	I	Y	A	R	C	G	A	R	G	S	Q	L	V	V	V	P	F	N	Q	G	S	K	Q	D	V	E	A	L	V	N	Y	I
Template Known Secondary structure			T	T							S			T	T	S												T	T								S	S																			T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
		77	.	.	80	.											.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	K	E	G	.	.	.	.	.	.	.	.	.	.	R	I	D	I	L	V	N	N	A	G	V	C	R	L	G	S	F	L	D	M	S	D	D	D	R	D	F	H	I	D	I	N	I	K	G	V	W	N	V	T	K	A	V	L	P	E	M	I	A	R	K	D	G	R	I	V	M	M	S	S	V	T	G	D	M
Query Conservation							.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.																																										.
Template Conservation																																																										.
Template Sequence		Y	D	T	K	N	G	L	G	W	D	L	D	Y	V	V	P	F	A	A	I	P	E	N	G	R	E	I	D	S	I	D	S	K	S	E	L	A	H	R	I	M	L	T	N	L	L	R	L	L	G	A	I	K	T	Q	K	.	K	E	R	G	Y	E	T	R	P	A	Q	V	I	L	P	L	S	P	N	H	G	T	F
Template Known Secondary structure				S	S	S	S						S											T	T			G	G	G													T															.			T	T			S											S		S	S	S	S
Template Predicted Secondary structure																																																										.
Template SS confidence
		730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.		.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	P	G	E	T	A	Y	A	L	T	K	A	A	I	V	G	L	T	K	S	L	A	V	E	Y	A	Q	S	G	I	R	V	N	A	I	C	P	G	Y	V	R	T	P	M	A	E	S	I	A	R	Q	S	N	P	E	D	P	E	S	V	L	T	E	M	A	K	A	I	P	M	R	R	L	A	D	P	L	E
Query Conservation
Alig confidence			.	.	.																																								.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.																																								.	.	.	.	.	.	.	.	.
Template Sequence		G	.	.	.	N	D	G	L	Y	S	E	S	K	L	A	L	E	T	L	F	N	R	W	Y	S	E	S	W	G	N	Y	L	T	I	C	G	A	V	I	G	W	T	R	.	.	.	.	.	.	.	.	.	G	T	G	L	M	S	A	N	N	L	V	A	E	G	V	E	K	L	G	V	R	T	F	S	Q	Q	E	M
Template Known Secondary structure		S	.	.	.			S	S								G	G	G								S	S		T	T	T											B		.	.	.	.	.	.	.	.	.		T	T	S		S					T						T	T	T				B
Template Predicted Secondary structure			.	.	.																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		809				810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.										.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	E	L	A	A	F	L	A	S	D	E	S	S	Y	L	T	G	T	Q	N	V	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	N	L	L	G	L	M	A	P	A	I	V	N	L	C	Q	S	D	P	V	F	A	D
Template Known Secondary structure										S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		877	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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