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Job DescriptionP37440
Confidence100.00%DateThu Jan 5 11:55:36 GMT 2012
Rank61Aligned Residues241
% Identity32%Templatec2pd6D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:estradiol 17-beta-dehydrogenase 8; PDBTitle: structure of human hydroxysteroid dehydrogenase type 8, hsd17b8
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  GKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG
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Template Sequence  NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRA. . . AAQETVRLLNHAAFQADVSEARAARCLLEQVQACFSR
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TTTT
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   7..10.........20.........30.........40...... ...50.........60.........70.........80...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  RIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAA
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Template Sequence  PPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAG
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GGG

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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  IVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESSY
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Template Sequence  VIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP. . . . . . . . QKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGY
Template Known Secondary structure  GGGT
SB
STTTTTS
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B
SGGGTT
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   176...180.........190.........200.........210. ........220.........230.........240.......
 
   242.......250...
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Query Sequence  LTGTQNVIDGGS
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Template Sequence  ITGTSVEVTGGL
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   248.250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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