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Job DescriptionP37440
Confidence95.33%DateThu Jan 5 11:55:36 GMT 2012
Rank388Aligned Residues191
% Identity17%Templatec2d3tB_
PDB info PDB header:lyase, oxidoreductase/transferaseChain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40. ........50.........60.........70.........80.
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Query Sequence  KTALITGALQGIGEGIARTFARHGANLILLDISPE. . . . . IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG
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Template Sequence  KQAAVLGA. GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGN
Template Known Secondary structure  SS

.TTTT


SSTTTSS

SSGGGGGG
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   315....320.. .......330.........340.........350.........360.........370.........380.........390...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  RIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAA
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Template Sequence  VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDL
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S
TTTS
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SSS
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GGG

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TT

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   394.....400.........410.........420.........430.........440.........450.........460.........470...
 
   162.......170.........180.........190.........
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Query Sequence  IVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQ
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Template Sequence  AVATTVAYAKKMGKNPIVVN. DCPGFLVNRVLFPYFGG
Template Known Secondary structure  TT
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   474.....480.........490... ......500.........510
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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